Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7c18
(130 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 32 0.29
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 32 0.29
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 32 0.29
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 32 0.29
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 32 0.29
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 32 0.29
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 32 0.29
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 32 0.29
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 32 0.29
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 32 0.29
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 32 0.38
X59303-1|CAA41990.1| 1265|Homo sapiens valyl-tRNA synthetase pro... 27 8.2
M98326-1|AAA81332.1| 1063|Homo sapiens valyl-tRNA synthetase pro... 27 8.2
BX248133-11|CAM26113.1| 1182|Homo sapiens valyl-tRNA synthetase ... 27 8.2
BC012808-1|AAH12808.1| 1264|Homo sapiens valyl-tRNA synthetase p... 27 8.2
BA000025-12|BAB63303.1| 1264|Homo sapiens valyl tRNA synthetase ... 27 8.2
AL671762-1|CAI18211.1| 1264|Homo sapiens valyl-tRNA synthetase p... 27 8.2
AL662899-2|CAI18384.1| 1264|Homo sapiens valyl-tRNA synthetase p... 27 8.2
AL662834-12|CAI17732.1| 1264|Homo sapiens valyl-tRNA synthetase ... 27 8.2
AF134726-10|AAD21819.1| 1264|Homo sapiens G7A protein. 27 8.2
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 2 PDXXXMLKMLDFNNXNGLQLTQP 70
PD MLK+LDF + + LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 2 PDXXXMLKMLDFNNXNGLQLTQP 70
PD MLK+LDF + + LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 2 PDXXXMLKMLDFNNXNGLQLTQP 70
PD MLK+LDF + + LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 2 PDXXXMLKMLDFNNXNGLQLTQP 70
PD MLK+LDF + + LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 2 PDXXXMLKMLDFNNXNGLQLTQP 70
PD MLK+LDF + + LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 2 PDXXXMLKMLDFNNXNGLQLTQP 70
PD MLK+LDF + + LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 2 PDXXXMLKMLDFNNXNGLQLTQP 70
PD MLK+LDF + + LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 2 PDXXXMLKMLDFNNXNGLQLTQP 70
PD MLK+LDF + + LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 2 PDXXXMLKMLDFNNXNGLQLTQP 70
PD MLK+LDF + + LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 2 PDXXXMLKMLDFNNXNGLQLTQP 70
PD MLK+LDF + + LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 2 PDXXXMLKMLDFNNXNGLQLTQP 70
PD MLK+LDF + LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGGLSNLQVTQP 122
>X59303-1|CAA41990.1| 1265|Homo sapiens valyl-tRNA synthetase protein.
Length = 1265
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 19 VEDAGLQQYXWPATNTASYPGWLW 90
+ + G Q Y +PA TA Y WL+
Sbjct: 998 LSNQGFQAYDFPAVTTAQYSFWLY 1021
>M98326-1|AAA81332.1| 1063|Homo sapiens valyl-tRNA synthetase
protein.
Length = 1063
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 19 VEDAGLQQYXWPATNTASYPGWLW 90
+ + G Q Y +PA TA Y WL+
Sbjct: 797 LSNQGFQAYDFPAVTTAQYSFWLY 820
>BX248133-11|CAM26113.1| 1182|Homo sapiens valyl-tRNA synthetase
protein.
Length = 1182
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 19 VEDAGLQQYXWPATNTASYPGWLW 90
+ + G Q Y +PA TA Y WL+
Sbjct: 915 LSNQGFQAYDFPAVTTAQYSFWLY 938
>BC012808-1|AAH12808.1| 1264|Homo sapiens valyl-tRNA synthetase
protein.
Length = 1264
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 19 VEDAGLQQYXWPATNTASYPGWLW 90
+ + G Q Y +PA TA Y WL+
Sbjct: 997 LSNQGFQAYDFPAVTTAQYSFWLY 1020
>BA000025-12|BAB63303.1| 1264|Homo sapiens valyl tRNA synthetase
protein.
Length = 1264
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 19 VEDAGLQQYXWPATNTASYPGWLW 90
+ + G Q Y +PA TA Y WL+
Sbjct: 997 LSNQGFQAYDFPAVTTAQYSFWLY 1020
>AL671762-1|CAI18211.1| 1264|Homo sapiens valyl-tRNA synthetase
protein.
Length = 1264
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 19 VEDAGLQQYXWPATNTASYPGWLW 90
+ + G Q Y +PA TA Y WL+
Sbjct: 997 LSNQGFQAYDFPAVTTAQYSFWLY 1020
>AL662899-2|CAI18384.1| 1264|Homo sapiens valyl-tRNA synthetase
protein.
Length = 1264
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 19 VEDAGLQQYXWPATNTASYPGWLW 90
+ + G Q Y +PA TA Y WL+
Sbjct: 997 LSNQGFQAYDFPAVTTAQYSFWLY 1020
>AL662834-12|CAI17732.1| 1264|Homo sapiens valyl-tRNA synthetase
protein.
Length = 1264
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 19 VEDAGLQQYXWPATNTASYPGWLW 90
+ + G Q Y +PA TA Y WL+
Sbjct: 997 LSNQGFQAYDFPAVTTAQYSFWLY 1020
>AF134726-10|AAD21819.1| 1264|Homo sapiens G7A protein.
Length = 1264
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 19 VEDAGLQQYXWPATNTASYPGWLW 90
+ + G Q Y +PA TA Y WL+
Sbjct: 997 LSNQGFQAYDFPAVTTAQYSFWLY 1020
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,625,034
Number of Sequences: 237096
Number of extensions: 174522
Number of successful extensions: 438
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 76,859,062
effective HSP length: 23
effective length of database: 71,405,854
effective search space used: 1356711226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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