Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7c18
         (130 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...    36   0.006
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...    36   0.006
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...    36   0.006
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...    36   0.006
U61264-1|AAB08000.1|  537|Drosophila melanogaster dopamine D1 re...    26   6.3  
U34383-1|AAC47161.1|  539|Drosophila melanogaster dopamine recep...    26   6.3  
BT010212-1|AAQ23530.1|  537|Drosophila melanogaster RH55627p pro...    26   6.3  
AE014297-4403|AAN14180.1|  539|Drosophila melanogaster CG18741-P...    26   6.3  
AE014297-4402|AAF56908.2|  537|Drosophila melanogaster CG18741-P...    26   6.3  

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score = 36.3 bits (80), Expect = 0.006
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +2

Query: 5   DXXXMLKMLDFNNXNGLQLTQPAT 76
           D   MLK+LDF+N  GLQLTQP T
Sbjct: 101 DTKEMLKLLDFHNIRGLQLTQPNT 124


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score = 36.3 bits (80), Expect = 0.006
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +2

Query: 5   DXXXMLKMLDFNNXNGLQLTQPAT 76
           D   MLK+LDF+N  GLQLTQP T
Sbjct: 101 DTKEMLKLLDFHNIRGLQLTQPNT 124


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score = 36.3 bits (80), Expect = 0.006
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +2

Query: 5   DXXXMLKMLDFNNXNGLQLTQPAT 76
           D   MLK+LDF+N  GLQLTQP T
Sbjct: 101 DTKEMLKLLDFHNIRGLQLTQPNT 124


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score = 36.3 bits (80), Expect = 0.006
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +2

Query: 5   DXXXMLKMLDFNNXNGLQLTQPAT 76
           D   MLK+LDF+N  GLQLTQP T
Sbjct: 101 DTKEMLKLLDFHNIRGLQLTQPNT 124


>U61264-1|AAB08000.1|  537|Drosophila melanogaster dopamine D1
           receptor DAMB protein.
          Length = 537

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 28  AGLQQYXWPATNTASYPGWLWWQA 99
           AGL    W  ++  S+P  +WW+A
Sbjct: 227 AGLIAAVWICSSAISFPAIVWWRA 250


>U34383-1|AAC47161.1|  539|Drosophila melanogaster dopamine receptor
           protein.
          Length = 539

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 28  AGLQQYXWPATNTASYPGWLWWQA 99
           AGL    W  ++  S+P  +WW+A
Sbjct: 227 AGLIAAVWICSSAISFPAIVWWRA 250


>BT010212-1|AAQ23530.1|  537|Drosophila melanogaster RH55627p
           protein.
          Length = 537

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 28  AGLQQYXWPATNTASYPGWLWWQA 99
           AGL    W  ++  S+P  +WW+A
Sbjct: 227 AGLIAAVWICSSAISFPAIVWWRA 250


>AE014297-4403|AAN14180.1|  539|Drosophila melanogaster CG18741-PB,
           isoform B protein.
          Length = 539

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 28  AGLQQYXWPATNTASYPGWLWWQA 99
           AGL    W  ++  S+P  +WW+A
Sbjct: 227 AGLIAAVWICSSAISFPAIVWWRA 250


>AE014297-4402|AAF56908.2|  537|Drosophila melanogaster CG18741-PA,
           isoform A protein.
          Length = 537

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 28  AGLQQYXWPATNTASYPGWLWWQA 99
           AGL    W  ++  S+P  +WW+A
Sbjct: 227 AGLIAAVWICSSAISFPAIVWWRA 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,578,753
Number of Sequences: 53049
Number of extensions: 42826
Number of successful extensions: 180
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 24,988,368
effective HSP length: 23
effective length of database: 23,768,241
effective search space used: 451596579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)