Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7c13
         (562 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in IAP...   137   1e-31
UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in IAP2...   124   2e-27
UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5; ...    60   3e-08
UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16; Nucleopolyhedro...    48   1e-04
UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineat...    38   0.12 
UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -...    37   0.37 
UniRef50_Q80LN7 Cluster: Putative uncharacterized protein; n=1; ...    37   0.37 

>UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in
           IAP2-VLF1 intergenic region; n=7;
           Nucleopolyhedrovirus|Rep: Uncharacterized 15.5 kDa
           protein in IAP2-VLF1 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 133

 Score =  137 bits (332), Expect = 1e-31
 Identities = 67/91 (73%), Positives = 71/91 (78%)
 Frame = +2

Query: 290 MSNLMKNFFTEXXXXXXXXXXXXXXXXXXXDWLCEQVYPDKDFSLKLKRVINMFLNDEIE 469
           MSNLMKNFFTE                   +WLCEQVYPDKDFSLKLKRV+NMFLN+EIE
Sbjct: 1   MSNLMKNFFTELVKSTTFTTKVSVVKTTLSNWLCEQVYPDKDFSLKLKRVVNMFLNNEIE 60

Query: 470 NDKIYXLVETVDSSNKLSRRQVDFLIHALLN 562
           N+KIY LVETVDSSNKLSRRQVDFLIHALLN
Sbjct: 61  NNKIYKLVETVDSSNKLSRRQVDFLIHALLN 91


>UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in
           IAP2-VLF1 intergenic region; n=12;
           Nucleopolyhedrovirus|Rep: Uncharacterized 9.4 kDa
           protein in IAP2-VLF1 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 84

 Score =  124 bits (298), Expect = 2e-27
 Identities = 67/85 (78%), Positives = 67/85 (78%)
 Frame = +2

Query: 14  MNLYLLLGALTIFSLVYDKKENSXXXXXXXXXXXXXXXXSPAIISKNTESNVEDIPSHKA 193
           MNLYLLLGAL IFSLVYDKKENS                SPAIISKNTES VEDIPSHKA
Sbjct: 1   MNLYLLLGALAIFSLVYDKKENSIFLYLLILFLVFIIV-SPAIISKNTESTVEDIPSHKA 59

Query: 194 KSVRKKLEIEQALDAILNKNTSSID 268
           KSVRKKLEIEQALDAILNKNTSSID
Sbjct: 60  KSVRKKLEIEQALDAILNKNTSSID 84


>UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5;
           Nucleopolyhedrovirus|Rep: Uncharacterized 14.9 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 130

 Score = 60.1 bits (139), Expect = 3e-08
 Identities = 25/61 (40%), Positives = 40/61 (65%)
 Frame = +2

Query: 380 DWLCEQVYPDKDFSLKLKRVINMFLNDEIENDKIYXLVETVDSSNKLSRRQVDFLIHALL 559
           DWL  QVYPD+ FS K + V+ MF++ +++ + +Y LV T+D S  L+  Q+++L  A  
Sbjct: 31  DWLNSQVYPDERFSAKWRGVLKMFVDGQLDEESVYCLVNTIDPSKLLTVGQINYLARAFR 90

Query: 560 N 562
           N
Sbjct: 91  N 91


>UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16;
           Nucleopolyhedrovirus|Rep: LdOrf-85 peptide - Lymantria
           dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
          Length = 86

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = +2

Query: 149 KNTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 268
           K   S+  D+ + KAKS++KK ++E+A DAILNKNTSS D
Sbjct: 47  KPESSDAADLQTGKAKSIKKKRDLERAFDAILNKNTSSTD 86


>UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineata
           nucleopolyhedrosis virus|Rep: Ac75-like protein - Clanis
           bilineata nucleopolyhedrosis virus
          Length = 130

 Score = 38.3 bits (85), Expect = 0.12
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = +2

Query: 407 DKDFSLKLKRVINMFLNDEIENDKIYXLVETVDSSNKLSRRQVDFL 544
           DK F  K  +V+ MF+  +I  + +  ++  VDS NKL+  Q+DFL
Sbjct: 38  DKRFCDKFVKVLKMFIASQITIEDMCNIMAAVDSPNKLTADQIDFL 83


>UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -
           Xestia c-nigrum granulosis virus (XnGV) (Xestia
           c-nigrumgranulovirus)
          Length = 85

 Score = 36.7 bits (81), Expect = 0.37
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 152 NTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 268
           NT+S   D+ + + K  +KK       DAILNKN SS++
Sbjct: 47  NTDSAPHDLYNEETKKAKKKKHFNDMFDAILNKNNSSLE 85


>UniRef50_Q80LN7 Cluster: Putative uncharacterized protein; n=1;
           Adoxophyes honmai NPV|Rep: Putative uncharacterized
           protein - Adoxophyes honmai nucleopolyhedrovirus
          Length = 129

 Score = 36.7 bits (81), Expect = 0.37
 Identities = 16/49 (32%), Positives = 33/49 (67%)
 Frame = +2

Query: 416 FSLKLKRVINMFLNDEIENDKIYXLVETVDSSNKLSRRQVDFLIHALLN 562
           F++KL +++N+FL ++IE + +  L+ + D  N L+  QV++L +  +N
Sbjct: 41  FTVKLVKIVNLFLQEKIEVEDLQHLLNSTDGLN-LTINQVNYLYYQAVN 88


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,114,977
Number of Sequences: 1657284
Number of extensions: 7887046
Number of successful extensions: 19778
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19772
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)