Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7c08
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   2.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.5  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.6  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.6  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
          protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 83 RALQRGLDLESQLMSEISPRSPAYSPP 3
          R +++  D  S L++   P +PAYSPP
Sbjct: 6  RQVKQEADSTSPLLTP--PHNPAYSPP 30


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 572 CLRVERSLYLYCLSVVYD 625
           C  + R  Y YC+S+ ++
Sbjct: 50  CYNLRRIYYFYCVSITFN 67


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 134 DPHFQWCHLLDLTTDRHC 187
           DP   +C  L++T   HC
Sbjct: 60  DPSADYCLFLEMTLAHHC 77


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 218 TYHVHGQVNISNDDPLLSQ 162
           ++H H  V+ +N +PLLS+
Sbjct: 56  SFHDHVSVSNTNTEPLLSE 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,664
Number of Sequences: 336
Number of extensions: 2555
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)