Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7c04
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    29   0.030
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    29   0.030
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.37 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    24   1.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.4  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   6.0  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 29.5 bits (63), Expect = 0.030
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
 Frame = +2

Query: 515 DEIDLHQNLRHEEALRN-LDVTLFRNEL-----ELQNNLSQALVQNLSEQDLRNLDLSR 673
           D IDL+Q L+ +  L+N ++  L R +      EL+NNL+ AL  + S+   R  D SR
Sbjct: 27  DNIDLNQILKSDRLLKNYVNCLLDRGKCSPDGQELKNNLADALQTSCSKCSQRQKDGSR 85


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 29.5 bits (63), Expect = 0.030
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
 Frame = +2

Query: 515 DEIDLHQNLRHEEALRN-LDVTLFRNEL-----ELQNNLSQALVQNLSEQDLRNLDLSR 673
           D IDL+Q L+ +  L+N ++  L R +      EL+NNL+ AL  + S+   R  D SR
Sbjct: 27  DNIDLNQILKSDRLLKNYVNCLLDRGKCSPDGQELKNNLADALQTSCSKCSQRQQDGSR 85


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 340 VVFTFQLMFLKTVHVHFVILFFGIMFFSFH 251
           ++FT  L+FL  ++   V LFF +  + F+
Sbjct: 121 IIFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
 Frame = -2

Query: 367 MQLLHGNLGVVFTFQLMFLKTVHVHFVILFFGIMFFSFHK------IHF*KPFSI*RA*L 206
           M LL     ++FT  L+FL  ++  +  L   +  + F +       HF   FS+    L
Sbjct: 264 MHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSL--YPL 321

Query: 205 SSVFFRNDYKP 173
            S F+ N  +P
Sbjct: 322 KSTFYLNVVRP 332


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 292 FVILFFGIMFFSF 254
           FVILFFG+ F  F
Sbjct: 4   FVILFFGVFFIIF 16


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 368 DATAPWKFGCGIHFPADVSEDCPCT 294
           D   P +F  G + PAD  ++C CT
Sbjct: 545 DDIDPQQFCNGDNRPADCQQNCMCT 569


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
 Frame = -2

Query: 421 QLEVVDYTGVVQRGLHSLMQLLHGNLGVVFTFQLMFLKTVHVHFVILFFGIMFFSFH--- 251
           QL  ++    +   L  L++L +   G+V    LMF     V FV++   I FF+ +   
Sbjct: 498 QLNTLNKICALHHHLSKLVKLFNETFGIVLL--LMF----GVSFVVIVITIFFFTANVQA 551

Query: 250 -KIHF*KPFSI*RA*LSSVFFRNDYKPNLKICYANL 146
            +++F    S+    LS+V F  D      +CY+ +
Sbjct: 552 GELYF---MSLLNPILSNVTFVIDVVYVCDVCYSTI 584


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
 Frame = -2

Query: 421 QLEVVDYTGVVQRGLHSLMQLLHGNLGVVFTFQLMFLKTVHVHFVILFFGIMFFSFH--- 251
           QL  ++    +   L  L++L +   G+V    LMF     V FV++   I FF+ +   
Sbjct: 223 QLNTLNKICALHHHLSKLVKLFNETFGIVLL--LMF----GVSFVVIVITIFFFTANVQA 276

Query: 250 -KIHF*KPFSI*RA*LSSVFFRNDYKPNLKICYANL 146
            +++F    S+    LS+V F  D      +CY+ +
Sbjct: 277 GELYF---MSLLNPILSNVTFVIDVVYVCDVCYSTI 309


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 605 NNLSQALVQNLSEQD 649
           NNLS+   QNLS  D
Sbjct: 506 NNLSETFTQNLSLMD 520


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,483
Number of Sequences: 336
Number of extensions: 3388
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)