Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7c04
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35444| Best HMM Match : Hist_deacetyl (HMM E-Value=1.90577e-43) 33 0.18
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 33 0.18
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 32 0.56
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 31 0.99
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_24313| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_30819| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0) 29 3.0
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 28 7.0
SB_5523| Best HMM Match : Extensin_2 (HMM E-Value=0.0052) 28 7.0
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_16900| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_27847| Best HMM Match : zf-ZPR1 (HMM E-Value=2.1) 28 9.2
SB_20760| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_830| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_35444| Best HMM Match : Hist_deacetyl (HMM E-Value=1.90577e-43)
Length = 636
Score = 33.5 bits (73), Expect = 0.18
Identities = 40/146 (27%), Positives = 67/146 (45%)
Frame = +2
Query: 263 EHNAEEENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPRQM 442
+ N E + + ++ LQ+ Q +S Y Q+ +EQ+ MQ S +G+ Q L ++
Sbjct: 117 KQNQELLHQQQHLQFLQQ-QRQSRYLQQLQLEQI---MQQS-GKAGL----QKALQQKET 167
Query: 443 STLMLKTNHLSRSLNFNETIHPQRDEIDLHQNLRHEEALRNLDVTLFRNELELQNNLSQA 622
S L+LK + E H + E Q L +L F E +LQ L
Sbjct: 168 SALLLKEHMEQVQQKEQERYHLLQTE----QQLVQVGTTEDLPSPRFLKEQQLQELL--- 220
Query: 623 LVQNLSEQDLRNLDLSRINEVQLQNL 700
L+Q L +QDL+ ++++ +Q Q L
Sbjct: 221 LIQQLKQQDLQPRNITQKQLLQHQQL 246
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 33.5 bits (73), Expect = 0.18
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +2
Query: 488 FNETIHPQRDEIDLHQNLRHEEALRNLDVTLFRNELELQNNLSQALVQNLSEQDLRNLDL 667
FN QRD+I Q + E +R +L+L L Q L + E +++ L L
Sbjct: 1016 FNRAKELQRDKISALQLMLEEAEIRFKSRESRTEDLDLIQELKQMLAER--ELEMKKL-L 1072
Query: 668 SRINEVQLQNLRTDIPLHHES 730
+N+++ QN R D+ H S
Sbjct: 1073 RNMNDLRSQNKRRDLVFHTRS 1093
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 33.1 bits (72), Expect = 0.24
Identities = 30/139 (21%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Frame = +2
Query: 239 KMDFVKREEHNAEEENYKMYMD--SLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHN 412
K+ ++E + EEN ++ + +L+ L++E S + A+Q+ L+++
Sbjct: 501 KLSISLKKEFSVTEENERLLREKKALESRILDAEEQVSSSKGMI-TALQAKLDDALNSRE 559
Query: 413 FQLPLSPRQMSTLMLKTNHLSRSLNFNETIHPQRDEIDLHQNLRHEEALRNLDVTLFRNE 592
+ ++ L K LS+ L E+ +RD + +L R+ ++T NE
Sbjct: 560 AKSDWDSNRIYELEEKIKDLSKKLKDVESDLAERDRQIQNLSLEKVNESRDDEITELENE 619
Query: 593 LELQNNLSQALVQNLSEQD 649
LE Q + + + L E++
Sbjct: 620 LEEQREIIKENEEKLKEKE 638
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 31.9 bits (69), Expect = 0.56
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Frame = +2
Query: 305 SLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPRQMSTLM-LKTNHLSRS 481
S +KH E +E L A+ + Q L RQ L LK HL
Sbjct: 812 SAEKHVEEMMEKHASEIEMLQAALDTEKEK---YEALQQQLQARQQEELEDLKAQHLKEL 868
Query: 482 LNFNETIHPQRDEIDLHQNLRHEEALRNLDVTL---FRNELELQNNLSQALVQNLSEQDL 652
N E I P+ D + +H+E L +L L + E++ + + +Q+LS++ L
Sbjct: 869 DNLKEGITPEIDALKSELEKQHQEELVSLKEYLEEKHQAEIKSIDGDFKQRMQSLSQELL 928
Query: 653 RNLDLSRINEVQ 688
+ S+++ +Q
Sbjct: 929 STDEQSKVDVIQ 940
Score = 29.1 bits (62), Expect = 4.0
Identities = 31/153 (20%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Frame = +2
Query: 236 LKMDFVK---REEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQLHQAMQSSLNNSGI 403
LK +F++ +E ++ + ++ L QK + E + + + ++L + ++S +
Sbjct: 1024 LKDEFIQVLEQERRSSPDSGMSEALEELRQKLEAEHQEDIEATRKELIEQVESLRDELQE 1083
Query: 404 VHNFQLPLSPRQMSTLMLK-TNHLSRSLNFNETIHPQRDEIDLHQNLRHEEALRNLDVTL 580
+ + RQ T M K + + N +H DE+ + N +HE+ L L +
Sbjct: 1084 AATRDIEDAKRQFQTEMEKRVEEVQHAAQAN--LHASVDELRKNLNAKHEKQLAELQASH 1141
Query: 581 FRNELELQNNLSQAL-VQNLSEQDLRNLDLSRI 676
++ LQ L Q V+ + ++ + D+ R+
Sbjct: 1142 EQDLKALQAKLDQEKEVERVRFEEEKQRDIERL 1174
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 536 NLRHEEALRNLDVTLFRNEL-ELQNNLSQALVQNLSEQDLRNLDLS-RINEVQL 691
N HE + L +L EL ELQNNL Q L + D + DL +I EV++
Sbjct: 1394 NAEHEREKKELK-SLHNKELQELQNNLKQQLAVVQQKSDKLSEDLKVKIEEVEI 1446
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 31.1 bits (67), Expect = 0.99
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 560 RNL-DVTLFRNELELQNNLSQALVQNLSEQDLRNLDLSRINEVQLQNLR 703
+NL D+T+ R+ L+L N S Q L DL N D+S I + +NLR
Sbjct: 69 KNLGDLTVSRSPLKLLKNTSFQDYQYLKWLDLSNNDISDIQDGTFENLR 117
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 533 QNLRHEEALRNLDVTLFRNELELQNNLSQALVQNLSEQDLRNLDLSRINEVQLQNLRTDI 712
+ L E+ L+ LDVT + E E + ++ + S ++L ++ N+VQLQNL T
Sbjct: 1813 KELGMEKVLKELDVTWSQMEFEHEEHVRTHIPLLKSSEEL--IETLEDNQVQLQNLMTSK 1870
Query: 713 PLHH 724
+ H
Sbjct: 1871 YIGH 1874
>SB_24313| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 30.3 bits (65), Expect = 1.7
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +2
Query: 314 KHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPRQMSTLM-LKTNHLSRSLNF 490
+HQ ++M + QA + S ++ QLPL+P+Q + L + H S
Sbjct: 183 EHQKPVMTQGAVTMLPVSQAKIAVSQQSQLLPKQQLPLTPQQQRQVQHLSSKHSSSK--- 239
Query: 491 NETIHPQRD-EIDLHQNLRHEEALRNLDVTLFRNELELQNNLSQA 622
I PQ+ L Q L H++ + + + + +L++N S A
Sbjct: 240 QPLILPQQPVSAQLQQQLHHQQLMLVIQQQQQQQQQQLKDNRSSA 284
>SB_30819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +2
Query: 296 YMDSLQKHQLESEYHTQISMEQLHQAMQSSLNN---SGIVHNFQLPLSPRQMSTLMLKTN 466
Y++S+ ++E E+ + ++ +A + N SG+V ++ P + +
Sbjct: 63 YIESMTSEEVELEFKRLLERDKRRRAYEEFTNERRASGLVSVTKVTYQPDIARSPAERDL 122
Query: 467 HLSRSLNFNETIHPQRDEIDLHQNLRHEE 553
L R L E I +RDE++ + L +E
Sbjct: 123 RLQRLLAETERIERERDEMERRRRLSSDE 151
>SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0)
Length = 1038
Score = 29.5 bits (63), Expect = 3.0
Identities = 31/173 (17%), Positives = 72/173 (41%), Gaps = 4/173 (2%)
Frame = +2
Query: 182 VVTEKN*RQLSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSLQKHQLESEYHTQISMEQ 361
++ +K+ ++ L FL+ D + +E + K L+K + Y E+
Sbjct: 822 LLVKKHEKEKDKLQKSHFLEQDKLFKELDRVKTALRKRVDKDLKKSEKIGSY------EE 875
Query: 362 LHQAMQSSLNNSGIVHNFQ---LPLSPRQMSTLMLKTNHLSRSLNFNETIHPQRDEIDLH 532
++ +N HN L R+ +L+ + + + PQ +E+D
Sbjct: 876 AYKKGMDEINVLNQEHNKMVDDLKRDHREQIITLLRRQLAEQFSLAKQQLEPQYEELDRV 935
Query: 533 QNLRHEEALRNLD-VTLFRNELELQNNLSQALVQNLSEQDLRNLDLSRINEVQ 688
L HE+ ++ +D + R + + ++ QA+ + +D ++ + ++ E Q
Sbjct: 936 MILAHEDQIKQMDELHTKRKREQNKKHIEQAVKERQKMKDFQDKEKVQLQEDQ 988
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 28.3 bits (60), Expect = 7.0
Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Frame = +2
Query: 236 LKMDFVKREEHNAEEENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNF 415
L++DFV E++ K +D + + + + ++ ++ + L N H
Sbjct: 167 LEIDFVDESVRRLEQQ--KQTLDYEVRELKQKKQNLELELKNAEKKGSRQLENMLKDHEE 224
Query: 416 QLPLSPRQMSTLMLKTNHLSRSLN-FNETI-HPQRDEIDLHQNLRHEEALRNLDVTLFR- 586
++ + L + L +N F + H + +E L + R +E N + F
Sbjct: 225 EVRRMKEERKDLCEEIKALREEVNEFKARVSHLKSEERSLDR--RTKELTNNANELEFTL 282
Query: 587 NELELQNNLSQALVQ-----------NLSEQDLRNLD--LSRINEVQLQNLRTDIPLHHE 727
ELEL+ + ++Q NLS+ D+RN + +RI+ V ++ +R HE
Sbjct: 283 RELELEKQREEKVIQNLHRQQNDAQANLSQSDVRNNERHTNRISHVNIETVRNRNEQDHE 342
>SB_5523| Best HMM Match : Extensin_2 (HMM E-Value=0.0052)
Length = 532
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +2
Query: 275 EEENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLS-PRQMSTL 451
+ + Y + + +KHQ YH ++ + H +L N+Q+ L+ P + T
Sbjct: 342 KHQTYHVTLTPPRKHQT---YHVMLTPPRKHLTYHVTLTPPSKNQNYQVTLTPPHKHQTY 398
Query: 452 MLKTNHLSRSLNFNETIHPQRDEIDLHQNL 541
+ S+ L ++ T+ P + H L
Sbjct: 399 HVMLTQPSKHLTYHVTLTPPSKNQNYHVTL 428
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 27.9 bits (59), Expect = 9.2
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 5/146 (3%)
Frame = +2
Query: 239 KMD-FVKREEHNAEE--ENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQ-SSLNNSGIV 406
KMD ++++E ++ EN + M Q LE + +I+ + L + +S+
Sbjct: 921 KMDELMQQKELGVQDVTENLER-MHQEQISNLEERHRAEIAEQNLEWEKKIASIRKESEE 979
Query: 407 HNFQLPLSPRQMSTLMLKT-NHLSRSLNFNETIHPQRDEIDLHQNLRHEEALRNLDVTLF 583
++ + R+ +++ ++L + E ++DE DLH NLR R
Sbjct: 980 MMEKIIIESREKEEALVQDLDNLRNEIKQKEKQSKEKDE-DLHNNLRDLSDERQTSELKV 1038
Query: 584 RNELELQNNLSQALVQNLSEQDLRNL 661
R+ L N L + L E D R L
Sbjct: 1039 RDILNENNQLKKELTSVKKELDCRIL 1064
>SB_16900| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 284 NYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPRQMS 445
+Y ++SL+KH S YH QIS + S +N S +V + SP Q+S
Sbjct: 90 SYIKPVNSLEKH---SWYHGQISRNAAEYLLSSGINGSFLVRESE--SSPGQLS 138
>SB_27847| Best HMM Match : zf-ZPR1 (HMM E-Value=2.1)
Length = 149
Score = 27.9 bits (59), Expect = 9.2
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +2
Query: 476 RSLNFNETIHPQRDEIDLHQN--LRHEEALRNLDVTLFRNELELQNNLSQALVQNLSEQD 649
RS NF E + ++++ + +R E N D ++N S + SE+D
Sbjct: 7 RSSNFKEVLEKCWHDVEVGEAVFIRRFELHYNQDFETKLLNNNAKSNSSVKVNSQYSERD 66
Query: 650 LRNLDLSRINEVQLQNLRTDIP 715
+ L LS + QL+ + D+P
Sbjct: 67 IAKLKLSVGHRAQLKRVTKDLP 88
>SB_20760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/78 (20%), Positives = 31/78 (39%)
Frame = +2
Query: 314 KHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSLNFN 493
+H TQ S + H + + N L+P++ T+ T+ + + N
Sbjct: 9 RHNYTRNVTTQ-SHPKRHDTITPETSRHNYTRNVTTQLNPKRHDTITPDTSRHNYTRNVT 67
Query: 494 ETIHPQRDEIDLHQNLRH 547
+HP+R + + RH
Sbjct: 68 TQLHPKRHDTITPETSRH 85
>SB_830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1390
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +2
Query: 299 MDSLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLP----LSPRQMSTLMLKTN 466
+DS+Q QL E H QI + ++ +SG++ Q+P LS +Q + +
Sbjct: 618 LDSVQLEQLSFENHHQIMPGTPVSPSELAMVSSGLLSTSQIPSSIHLSTQQQIAIAVAQQ 677
Query: 467 HLSRSLNFNETIHPQ 511
+ L + PQ
Sbjct: 678 QQQQQLGLQSGLPPQ 692
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,556,899
Number of Sequences: 59808
Number of extensions: 405215
Number of successful extensions: 4540
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4539
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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