Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7c04
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    28   0.26 
AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    27   0.81 
AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding pr...    27   0.81 
AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding pr...    27   0.81 
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   7.5  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 28.3 bits (60), Expect = 0.26
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
 Frame = +2

Query: 260  EEHNAEEENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPRQ 439
            ++H  + E  K+ ++ LQK  + ++       EQ+    Q  +  SG        ++  +
Sbjct: 811  KKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALK 870

Query: 440  MSTLMLKTNHLSRSLNFNETIHPQRDEIDLHQN--LRHEEALRNLDVTLFRNE 592
                  K    S+S       H QRD++ L QN  L+ E   +  ++T  RNE
Sbjct: 871  QQIKQHKEKMNSQSKELKAKYH-QRDKL-LKQNDELKLEIKKKENEITKVRNE 921


>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +2

Query: 260 EEHNAEEENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSLNN 394
           +E   E+E  K YM+ L       + +  + +E+LH ++ SS+++
Sbjct: 61  DEEIHEDEKLKCYMNCLFHEAKVVDDNGDVHLEKLHDSLPSSMHD 105


>AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding
           protein AgamOBP1 protein.
          Length = 144

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +2

Query: 260 EEHNAEEENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSLNN 394
           +E   E+E  K YM+ L       + +  + +E+LH ++ SS+++
Sbjct: 61  DEEIHEDEKLKCYMNCLFHEAKVVDDNGDVHLEKLHDSLPSSMHD 105


>AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding
           protein protein.
          Length = 144

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +2

Query: 260 EEHNAEEENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSLNN 394
           +E   E+E  K YM+ L       + +  + +E+LH ++ SS+++
Sbjct: 61  DEEIHEDEKLKCYMNCLFHEAKVVDDNGDVHLEKLHDSLPSSMHD 105


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 349 FHGAVASSYAVLSEQLRYSPQL 414
           F  A  +SY VL E++R +P+L
Sbjct: 134 FEPAEGTSYKVLYEKIRLNPRL 155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,915
Number of Sequences: 2352
Number of extensions: 12767
Number of successful extensions: 46
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)