Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7b21
(123 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40; Eutele... 47 7e-05
UniRef50_Q4V414 Cluster: Ribosomal protein L37; n=1; Drosophila ... 46 1e-04
UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila ... 46 1e-04
UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90; Eukary... 43 0.001
UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing prote... 43 0.002
UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9; Eukar... 43 0.002
UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4; Pezizom... 42 0.004
UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal ... 41 0.005
UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29; Fung... 40 0.008
UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A, cyt... 38 0.033
UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2; Fungi/M... 36 0.23
UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10; Eurya... 34 0.72
UniRef50_A3H8B0 Cluster: Ribosomal protein L37e; n=1; Caldivirga... 33 1.7
UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18; Archa... 32 2.9
UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1; Methanobre... 30 8.8
>UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40;
Euteleostomi|Rep: 60S ribosomal protein L37 - Homo
sapiens (Human)
Length = 97
Score = 47.2 bits (107), Expect = 7e-05
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = +2
Query: 38 MTXGTSXFGKRRXXTHTLCXXCGRSSYH 121
MT GTS FGKRR THTLC CG +YH
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYH 28
>UniRef50_Q4V414 Cluster: Ribosomal protein L37; n=1; Drosophila
melanogaster|Rep: Ribosomal protein L37 - Drosophila
melanogaster (Fruit fly)
Length = 78
Score = 46.4 bits (105), Expect = 1e-04
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +2
Query: 38 MTXGTSXFGKRRXXTHTLCXXCGRSSYH 121
MT GT+ FGKR THT+C CG SSYH
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYH 28
>UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila
melanogaster|Rep: Ribosomal protein L37 - Drosophila
melanogaster (Fruit fly)
Length = 103
Score = 46.4 bits (105), Expect = 1e-04
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +2
Query: 38 MTXGTSXFGKRRXXTHTLCXXCGRSSYH 121
MT GT+ FGKR THT+C CG SSYH
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYH 28
>UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90;
Eukaryota|Rep: 60S ribosomal protein L37 -
Caenorhabditis elegans
Length = 91
Score = 43.2 bits (97), Expect = 0.001
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 38 MTXGTSXFGKRRXXTHTLCXXCGRSSYH 121
MT GT FGK+ +HTLC CG+SS+H
Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFH 28
>UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing protein;
n=5; Eukaryota|Rep: Ribosomal protein L37e containing
protein - Tetrahymena thermophila SB210
Length = 214
Score = 42.7 bits (96), Expect = 0.002
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2
Query: 41 TXGTSXFGKRRXXTHTLCXXCGRSSYH 121
T GT FGKR THTLC CG+++YH
Sbjct: 48 TRGTPAFGKRHQKTHTLCRRCGKATYH 74
>UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9;
Eukaryota|Rep: 60S ribosomal protein L37-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 95
Score = 42.7 bits (96), Expect = 0.002
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +2
Query: 38 MTXGTSXFGKRRXXTHTLCXXCGRSSYH 121
M GT FGKRR +HTLC CGR S+H
Sbjct: 1 MGKGTGSFGKRRNKSHTLCVRCGRRSFH 28
>UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L37 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 158
Score = 41.5 bits (93), Expect = 0.004
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +2
Query: 47 GTSXFGKRRXXTHTLCXXCGRSSYH 121
GTS FGKR +HTLC CGR S+H
Sbjct: 70 GTSSFGKRHNKSHTLCRRCGRRSFH 94
>UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal
protein L37; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L37 - Canis familiaris
Length = 124
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +2
Query: 47 GTSXFGKRRXXTHTLCXXCGRSSYH 121
GTS FGKRR HTLC CG +YH
Sbjct: 31 GTSSFGKRRNKMHTLCRRCGSKAYH 55
>UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29;
Fungi/Metazoa group|Rep: 60S ribosomal protein L37-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 88
Score = 40.3 bits (90), Expect = 0.008
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2
Query: 38 MTXGTSXFGKRRXXTHTLCXXCGRSSYH 121
M GT FGKR +HTLC CGR S+H
Sbjct: 1 MGKGTPSFGKRHNKSHTLCNRCGRRSFH 28
>UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A,
cytosolic; n=1; Neurospora crassa|Rep: Probable
ribosomal protein L37.e.A, cytosolic - Neurospora crassa
Length = 124
Score = 38.3 bits (85), Expect = 0.033
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +2
Query: 38 MTXGTSXFGKRRXXTHTLCXXCGR 109
MT GTS FGKR TH LC CGR
Sbjct: 1 MTKGTSSFGKRHTKTHGLCRRCGR 24
>UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2;
Fungi/Metazoa group|Rep: 60S RIBOSOMAL PROTEIN L37 -
Encephalitozoon cuniculi
Length = 90
Score = 35.5 bits (78), Expect = 0.23
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 38 MTXGTSXFGKRRXXTHTLCXXCGRSSYH 121
M+ GT+ FGK+ +C CGR SYH
Sbjct: 1 MSKGTASFGKKNKRNTEMCRRCGRQSYH 28
>UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L37e -
Halobacterium salinarium (Halobacterium halobium)
Length = 58
Score = 33.9 bits (74), Expect = 0.72
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 47 GTSXFGKRRXXTHTLCXXCGRSSYH 121
GT GK+ THT C CG SYH
Sbjct: 5 GTPSQGKKNTTTHTKCRRCGEKSYH 29
>UniRef50_A3H8B0 Cluster: Ribosomal protein L37e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L37e -
Caldivirga maquilingensis IC-167
Length = 61
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 38 MTXGTSXFGKR-RXXTHTLCXXCGRSSYH 121
MT GT FG+ R TH C CGR SY+
Sbjct: 1 MTKGTPSFGRMSRGKTHIRCPRCGRHSYN 29
>UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18;
Archaea|Rep: 50S ribosomal protein L37e - Pyrococcus
furiosus
Length = 62
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 38 MTXGTSXFGKRRXX-THTLCXXCGRSSYH 121
M GT+ FGKR TH C CGR SY+
Sbjct: 1 MGSGTATFGKRNSTPTHIRCRRCGRVSYN 29
>UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L37e - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 55
Score = 30.3 bits (65), Expect = 8.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 62 GKRRXXTHTLCXXCGRSSYH 121
GK+ TH C CGR++YH
Sbjct: 2 GKKNKKTHIRCRRCGRNTYH 21
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,775,024
Number of Sequences: 1657284
Number of extensions: 267570
Number of successful extensions: 344
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 575,637,011
effective HSP length: 21
effective length of database: 540,834,047
effective search space used: 10275846893
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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