Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7b20
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O10372 Cluster: Occlusion-derived virus envelope protei... 119 5e-26
UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep: ... 113 5e-24
UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:... 73 5e-12
UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;... 62 1e-08
UniRef50_P41701 Cluster: Occlusion-derived virus envelope protei... 57 3e-07
UniRef50_Q8QL68 Cluster: ODV-E18; n=9; Nucleopolyhedrovirus|Rep:... 45 0.002
UniRef50_O10371 Cluster: Occlusion-derived virus envelope protei... 43 0.006
UniRef50_Q9YMV5 Cluster: LdOrf-odv-e18 peptide; n=5; Nucleopolyh... 43 0.008
UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P4... 42 0.017
UniRef50_Q6QXM7 Cluster: ORF87; n=8; Granulovirus|Rep: ORF87 - A... 40 0.053
UniRef50_Q0ILA8 Cluster: ORF11; n=2; Nucleopolyhedrovirus|Rep: O... 40 0.053
UniRef50_Q1A4L9 Cluster: ODV-E27; n=1; Choristoneura occidentali... 36 0.86
UniRef50_Q8IKD8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q8CPC5 Cluster: Exonuclease SbcC; n=2; Staphylococcus e... 33 6.1
UniRef50_Q8IK87 Cluster: Putative uncharacterized protein; n=2; ... 33 8.0
>UniRef50_O10372 Cluster: Occlusion-derived virus envelope protein
E27; n=12; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E27 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 297
Score = 119 bits (287), Expect = 5e-26
Identities = 55/75 (73%), Positives = 68/75 (90%)
Frame = +3
Query: 432 MKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLST 611
MKRV+CNKVRTVTE+ ++ KI+KTY+L EFDLKNLSSLES+E K+KLALSKYMAM++T
Sbjct: 1 MKRVRCNKVRTVTEVKPNNAKIRKTYDLNEFDLKNLSSLESFENTKVKLALSKYMAMINT 60
Query: 612 LEMTQPLLEIFRKQS 656
LEMTQPLLE+FR ++
Sbjct: 61 LEMTQPLLEVFRNRA 75
>UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep:
Orf13 - Trichoplusia ni SNPV
Length = 296
Score = 113 bits (271), Expect = 5e-24
Identities = 54/78 (69%), Positives = 67/78 (85%), Gaps = 3/78 (3%)
Frame = +3
Query: 432 MKRVKCN---KVRTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAM 602
MKR KC KVRTVTEI+NSD+K+QK Y+L EFD+KNL+SLESY+TLKIKL + KYMAM
Sbjct: 1 MKRFKCQSTPKVRTVTEIINSDDKLQKEYDLTEFDVKNLNSLESYDTLKIKLVIVKYMAM 60
Query: 603 LSTLEMTQPLLEIFRKQS 656
L+TL++TQPLL IFR ++
Sbjct: 61 LNTLQLTQPLLTIFRDRN 78
>UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:
Odv-e27 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 284
Score = 73.3 bits (172), Expect = 5e-12
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +3
Query: 450 NKVRTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLSTLEMTQP 629
NKVRTVTEIVN +K+ K +EL E + KNL+SL SY+ ++ L+KY+AML LE +Q
Sbjct: 5 NKVRTVTEIVNGHDKLTKEFELDELNDKNLNSLVSYDNFNTRMVLAKYIAMLHMLETSQS 64
Query: 630 LLEIFRKQS 656
L+ FR ++
Sbjct: 65 LIATFRDRN 73
>UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;
Nucleopolyhedrovirus|Rep: Uncharacterized 55.8 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 484
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +3
Query: 3 RGDYESSSELKSLRDLNPWVQNTLLKLLIPD 95
RGDYES+SELKSLRDLNPWVQNTLL+LLI D
Sbjct: 441 RGDYESTSELKSLRDLNPWVQNTLLELLIVD 471
>UniRef50_P41701 Cluster: Occlusion-derived virus envelope protein
E18; n=7; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E18 - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 62
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/30 (86%), Positives = 28/30 (93%), Gaps = 1/30 (3%)
Frame = +1
Query: 328 PPSATG-FMNPLNATMRANPFMNTPQRQML 414
PP+A G F+NPLNATMRANPFMNTPQRQML
Sbjct: 33 PPNALGGFVNPLNATMRANPFMNTPQRQML 62
>UniRef50_Q8QL68 Cluster: ODV-E18; n=9; Nucleopolyhedrovirus|Rep:
ODV-E18 - Mamestra configurata NPV-A
Length = 83
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/31 (67%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +1
Query: 328 PPSATG--FMNPLNATMRANPFMNTPQRQML 414
PP G F+NPLNATMRANPF+N QR ML
Sbjct: 53 PPGGGGNTFVNPLNATMRANPFVNPAQRNML 83
>UniRef50_O10371 Cluster: Occlusion-derived virus envelope protein
E18; n=7; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E18 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 85
Score = 43.2 bits (97), Expect = 0.006
Identities = 34/99 (34%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Frame = +1
Query: 112 MIYXXXXXXXXXXXDVQSANYLNRLTPNMFLTXXXXXXXXXXXXMFVQXXXXXXXXXXXX 291
MIY D NYLNRLTPN FL +F+Q
Sbjct: 1 MIYTDPATGATTNTDAAGNNYLNRLTPNTFLIILAVVVIVALIIIFMQSSSNGNNS---- 56
Query: 292 XXXXXXXXXXXTPPSATGFMN-PLNATMRANPFMNTPQR 405
+ P+A M PLN TMRANPF+ TPQR
Sbjct: 57 -----------SSPAAVPQMGFPLNTTMRANPFVATPQR 84
>UniRef50_Q9YMV5 Cluster: LdOrf-odv-e18 peptide; n=5;
Nucleopolyhedrovirus|Rep: LdOrf-odv-e18 peptide -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 88
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +1
Query: 331 PSATGFMNPLNATMRANPFMNTPQRQML 414
P + NPLNATMRANPF+N QR ML
Sbjct: 61 PQRYAYTNPLNATMRANPFVNNAQRSML 88
>UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P49 -
Clanis bilineata nucleopolyhedrosis virus
Length = 498
Score = 41.5 bits (93), Expect = 0.017
Identities = 23/30 (76%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = +3
Query: 3 RGDYESSSELKSLRDL-NPWVQNTLLKLLI 89
RGDYESS KSL +L N WVQNTLLKLLI
Sbjct: 442 RGDYESS--FKSLHELKNSWVQNTLLKLLI 469
>UniRef50_Q6QXM7 Cluster: ORF87; n=8; Granulovirus|Rep: ORF87 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 298
Score = 39.9 bits (89), Expect = 0.053
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 444 KCNKVRTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLSTLEM 620
K RTVTEI +++ K Y++++ KN + E ++ L LSKY+AM+ L++
Sbjct: 14 KVENYRTVTEITDAENSYSKRYDVSDLVNKNEAYQRQQEKREMYLMLSKYVAMVLDLKL 72
>UniRef50_Q0ILA8 Cluster: ORF11; n=2; Nucleopolyhedrovirus|Rep:
ORF11 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 470
Score = 39.9 bits (89), Expect = 0.053
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +3
Query: 3 RGDYESSSELKSLRDLNPWVQNTLLKLLI 89
RGDYES S++K L+DL P VQN + +L+I
Sbjct: 434 RGDYESISDIKLLKDLTPLVQNAVFQLVI 462
>UniRef50_Q1A4L9 Cluster: ODV-E27; n=1; Choristoneura occidentalis
granulovirus|Rep: ODV-E27 - Choristoneura occidentalis
granulovirus
Length = 284
Score = 35.9 bits (79), Expect = 0.86
Identities = 16/50 (32%), Positives = 32/50 (64%)
Frame = +3
Query: 444 KCNKVRTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKY 593
K + RTVTEIV+S+ +K +++ + + KN + L+ + ++ L ++KY
Sbjct: 10 KVDSYRTVTEIVDSENFYKKEFDVTDLEYKNEAYLQKNKKRQLFLMVAKY 59
>UniRef50_Q8IKD8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 398
Score = 35.5 bits (78), Expect = 1.1
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +3
Query: 390 EHASKANVVDKCIKMKRVKCNKV--RTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYET 563
EH ++ V K ++ K KCNKV + E + +KIQ+ E + + LE E
Sbjct: 209 EHINEKENVIKGLEEKIQKCNKVIKDKIEENETNKKKIQQQNEKINYINDKIQDLER-EQ 267
Query: 564 LKIKLALSKYMAMLSTLEMTQPLLEIFRKQSR 659
K + KY+ + TL+ T ++E +K +
Sbjct: 268 KNDKEKIKKYIEKIKTLKKTSTIMEEKKKADK 299
>UniRef50_Q8CPC5 Cluster: Exonuclease SbcC; n=2; Staphylococcus
epidermidis|Rep: Exonuclease SbcC - Staphylococcus
epidermidis (strain ATCC 12228)
Length = 1009
Score = 33.1 bits (72), Expect = 6.1
Identities = 24/93 (25%), Positives = 44/93 (47%)
Frame = +3
Query: 381 SLYEHASKANVVDKCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYE 560
SL EH ++ K K+KR++ KV+ EI+ + +I++ E +L N E +
Sbjct: 527 SLGEHIDFESIAQKNNKIKRLESKKVKIRDEIIKIETRIEELNH-RENEL-NCEKQEKKD 584
Query: 561 TLKIKLALSKYMAMLSTLEMTQPLLEIFRKQSR 659
K++ L+ + + L+E F KQ +
Sbjct: 585 ISKLQKQLNHLNQLKDEQQSINKLVENFEKQEK 617
>UniRef50_Q8IK87 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1526
Score = 32.7 bits (71), Expect = 8.0
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Frame = +3
Query: 414 VDKCIKMKRVKC--NKVRTVTEIVNSDEKIQKT----YELAEFDLKNLS 542
V K +K +++K K++ + EIVN++E + K Y+L FDLKN++
Sbjct: 126 VQKILKEQKIKEPEKKIKRIQEIVNNEENLNKKFNQFYDLFCFDLKNIN 174
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,231,741
Number of Sequences: 1657284
Number of extensions: 8721106
Number of successful extensions: 21335
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21331
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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