Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7b17
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.4  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.7  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +1

Query: 163 FWS-SSDPGNFLQRSCYISGSI*MKNDFNNLFR 258
           FWS   D GN  +  CY+      K++   L R
Sbjct: 213 FWSLHPDSGNMFENGCYLRRQKRFKDEKKELIR 245


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +3

Query: 303 QTFHREVAKPTEVIINFRHFGMGVTDSQQQTKPTDKTPDQEKIMFRI 443
           Q +H+E+ K  +    F    M +   Q +T+P   TP + + M +I
Sbjct: 156 QIYHQELEKYEQACNEFTTHVMNLLREQSRTRPI--TPKEIERMVQI 200


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 358 ILGWVSQIVNNKQNRPTKLRIK 423
           IL  + + +N+K  +P K+R K
Sbjct: 102 ILSKIDETLNSKPLKPVKIRTK 123


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = -3

Query: 582 YQIEHFKPFLKIYHTCVLYCIT 517
           + +E+F+ ++  ++  +LY IT
Sbjct: 150 HTVEYFQNYIHFFYQLLLYLIT 171


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 358 ILGWVSQIVNNKQNRPTKLRIK 423
           IL  + + +N+K  +P K+R K
Sbjct: 98  ILSKIDETLNSKPLKPVKIRTK 119


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -2

Query: 574 RTFQALSKNISHLCIVLYYKNIFKSKQ 494
           ++F++L++  SH+    +Y NI   +Q
Sbjct: 486 QSFRSLAEMTSHMQQTQHYTNIISQEQ 512


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,715
Number of Sequences: 336
Number of extensions: 3900
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)