Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7b14
         (436 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q85TH5 Cluster: NADH dehydrogenase subunit 6; n=1; Meli...    35   0.65 
UniRef50_A0D9M5 Cluster: Chromosome undetermined scaffold_42, wh...    32   4.6  
UniRef50_Q9I8Y8 Cluster: Odorant receptor 7.1; n=68; Clupeocepha...    31   8.0  
UniRef50_A5ZT76 Cluster: Putative uncharacterized protein; n=1; ...    31   8.0  
UniRef50_Q23RI8 Cluster: 3'5'-cyclic nucleotide phosphodiesteras...    31   8.0  

>UniRef50_Q85TH5 Cluster: NADH dehydrogenase subunit 6; n=1;
           Melipona bicolor|Rep: NADH dehydrogenase subunit 6 -
           Melipona bicolor
          Length = 179

 Score = 35.1 bits (77), Expect = 0.65
 Identities = 22/69 (31%), Positives = 34/69 (49%)
 Frame = -3

Query: 224 LFTLGLVVFIYS*L**NDHACLKKYTACIITLLVVEINYNYIFCFIHLRRKYYLNFRFRI 45
           +FT+   + IY     N H  L  Y   II +  + I ++Y  C I+L +K    F+F  
Sbjct: 46  IFTIISSILIYMI---NPHLILYNYMTLIIMISGMMILFSYFICLINLEKKKMNKFKFIY 102

Query: 44  LPIFLHTIN 18
           L I+L  I+
Sbjct: 103 LFIYLFIIS 111


>UniRef50_A0D9M5 Cluster: Chromosome undetermined scaffold_42, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_42,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 305

 Score = 32.3 bits (70), Expect = 4.6
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 285 IKTNLCLQNLDLVSAIHXLSMTRMDRHHKADLLEWAL 395
           I+ N+CL N ++    + L   ++   HK  LLEW L
Sbjct: 257 IQCNICLHNFEIQEEYYKLKCHQLHMFHKQCLLEWVL 293


>UniRef50_Q9I8Y8 Cluster: Odorant receptor 7.1; n=68;
           Clupeocephala|Rep: Odorant receptor 7.1 - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 379

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = +3

Query: 225 CLTHLVIKIM*KNPXVSVIVIKTNLCLQNLDLVSAIHXLSMT 350
           CLTH+++ ++   P +   V+     +QN+DL++AI  +S+T
Sbjct: 294 CLTHMMLVMLYYMPVIIAYVLGNLRLVQNVDLLTAILTVSVT 335


>UniRef50_A5ZT76 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus obeum ATCC 29174|Rep: Putative
           uncharacterized protein - Ruminococcus obeum ATCC 29174
          Length = 86

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
 Frame = -3

Query: 134 TLLVVEINYNYIFCFI-------HLRRKYYLNFRFRILPIFLHTIN 18
           TLL+ E   N+IF          HLR   +L FRF +LP++L  +N
Sbjct: 33  TLLLREATRNFIFRSATTFPGRKHLRENAFLGFRFEMLPLYLWILN 78


>UniRef50_Q23RI8 Cluster: 3'5'-cyclic nucleotide phosphodiesterase
           family protein; n=1; Tetrahymena thermophila SB210|Rep:
           3'5'-cyclic nucleotide phosphodiesterase family protein
           - Tetrahymena thermophila SB210
          Length = 807

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = -3

Query: 176 NDHACLKKYTACIITLLVVEINYNYIFCFIHLRRKYYLNFRFRILPIFLHTINTDY 9
           ND + L+ + A    LL+ E N N    F+HL +  +   R RI+ + LHT N+ +
Sbjct: 609 NDKSPLENHHAFSTFLLMQEENCNI---FVHLTKDEFKKSRERIISMILHTDNSQH 661


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,649,228
Number of Sequences: 1657284
Number of extensions: 6711206
Number of successful extensions: 14209
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14205
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)