Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7b14
         (436 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3342|AAF56149.2|  699|Drosophila melanogaster CG10182-P...    27   8.3  
AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA...    27   8.3  
AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB...    27   8.3  

>AE014297-3342|AAF56149.2|  699|Drosophila melanogaster CG10182-PA
           protein.
          Length = 699

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
 Frame = -2

Query: 192 LIIVMK*SCLFKKI----YSLYYNITSC*NQLQLYFLLYTFKTQILFKFSFSYIANIS 31
           ++IV+   CLF  I    YSL     S   Q  LYF  +T  T  L  F F Y  +++
Sbjct: 451 VLIVLLSGCLFATIMVNKYSLVLKNFSMDAQKDLYFATHTHATPWLTGFLFGYSLHLN 508


>AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA,
           isoform A protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 417 SAMQNTDSRPTPANRPCDXGPSLSL 343
           S   N +S+PTPANRP     + SL
Sbjct: 316 SPSSNPNSKPTPANRPIVGSEAFSL 340


>AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB,
           isoform B protein.
          Length = 1209

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 417 SAMQNTDSRPTPANRPCDXGPSLSL 343
           S   N +S+PTPANRP     + SL
Sbjct: 316 SPSSNPNSKPTPANRPIVGSEAFSL 340


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,897,605
Number of Sequences: 53049
Number of extensions: 312947
Number of successful extensions: 637
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)