Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7b07
         (515 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   1.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.5  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   3.3  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   5.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   7.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.5  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 161 SSPPYNMPFGPLI 123
           SS P N+P+GP+I
Sbjct: 645 SSNPLNVPYGPVI 657


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -3

Query: 252 NCWYISFWGILLRITYPQRMMT 187
           N W++ FW    +  YP   +T
Sbjct: 423 NPWFVEFWEHHFQCRYPNASVT 444


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
 Frame = -1

Query: 296 FXSEFGMCVAGPTPTTAG---ISAFG 228
           F  EFG+C  GP     G   +SA+G
Sbjct: 380 FTVEFGLCKEGPDVKAYGAGLLSAYG 405


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 417 FHVRXHFHSRTRNVELCDVYVVSQ 346
           +H+R HF S+    E C    V++
Sbjct: 6   YHLRNHFGSKPFKCEKCSYSCVNK 29


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 402 HFHSRTRNVELCDVYVVSQLTACFTAG 322
           HFH  T +V +  V  ++ L  C T G
Sbjct: 195 HFHDYTGSVVIHVVGGLTGLIGCLTLG 221


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 139 GMLYGGDEIG 168
           G++Y GDEIG
Sbjct: 381 GVVYNGDEIG 390


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.137    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,835
Number of Sequences: 438
Number of extensions: 3421
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)