Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7b06
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.47 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 49  LAC*FSQYQTFIMDGVKLLGTCALIILL 132
           L C +  Y  FI+  + LL  C LIILL
Sbjct: 209 LPCIYYFYSAFIIFTIHLLFYCVLIILL 236


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 455  WKTAFQATKCWTTSIWNMTTALILTFTMNTNRP 553
            W ++   +  WTT+    TT    T T  T RP
Sbjct: 1042 WWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRP 1074


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 625 FLDTVTTNNVSSKYEEYIDCIVSN 696
           ++D V  NN     ++YI  +V+N
Sbjct: 230 YIDEVFNNNFGYDKKQYIGVVVAN 253


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
 Frame = +1

Query: 553 SHWSNMTVSDAKALLQN---PPKDRVM 624
           SHW N  +S ++  L N   PP+ +++
Sbjct: 112 SHWMNQDISFSRVKLTNTCSPPQGQLV 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,383
Number of Sequences: 336
Number of extensions: 3060
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)