Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7b02
         (361 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VP19 Cluster: CG7181-PA; n=5; Sophophora|Rep: CG7181-...    43   0.002
UniRef50_UPI0000F209A8 Cluster: PREDICTED: hypothetical protein;...    42   0.004
UniRef50_Q09JM4 Cluster: Cytochrome c oxidase polypeptide VIII; ...    40   0.017
UniRef50_Q4TC53 Cluster: Chromosome undetermined SCAF7053, whole...    37   0.092
UniRef50_Q692Y6 Cluster: Mitochondrial cytochrome c oxidase subu...    36   0.28 
UniRef50_UPI0000515C5B Cluster: PREDICTED: hypothetical protein;...    35   0.37 
UniRef50_A7PW36 Cluster: Chromosome chr8 scaffold_34, whole geno...    33   1.5  
UniRef50_A6DHX9 Cluster: Serine/threonine protein kinase; n=1; L...    33   2.0  
UniRef50_Q9LSL5 Cluster: Receptor protein kinase-like protein; n...    33   2.0  
UniRef50_Q8NTE9 Cluster: Hypothetical membrane protein; n=1; Cor...    32   2.6  
UniRef50_A1RFG2 Cluster: Fumarate reductase/succinate dehydrogen...    32   2.6  
UniRef50_Q9N5L5 Cluster: Putative uncharacterized protein; n=2; ...    32   3.5  
UniRef50_UPI0000DA3DE3 Cluster: PREDICTED: similar to Daxx-like ...    31   6.1  
UniRef50_Q0A5M3 Cluster: Putative uncharacterized protein; n=3; ...    31   8.0  

>UniRef50_Q9VP19 Cluster: CG7181-PA; n=5; Sophophora|Rep: CG7181-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 68

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 129 KNVAQQRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLVNIKHYR 281
           ++  Q R  SV+  PP  ++S  E + L G M      IPAWVL +I+ Y+
Sbjct: 15  RSAMQSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65


>UniRef50_UPI0000F209A8 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 138

 Score = 41.5 bits (93), Expect = 0.004
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +3

Query: 129 KNVAQQRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLVNIKHYRDK 287
           +++  +RN S+   PP+NK+  G+   +  +  V   A   W+L +I  YR++
Sbjct: 80  RDIVHKRNSSIYSKPPKNKIGPGQSFLIMSVFAVALLAPAGWILHHIPEYRER 132


>UniRef50_Q09JM4 Cluster: Cytochrome c oxidase polypeptide VIII;
           n=2; Ixodoidea|Rep: Cytochrome c oxidase polypeptide
           VIII - Argas monolakensis
          Length = 69

 Score = 39.5 bits (88), Expect = 0.017
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
 Frame = +3

Query: 93  IRNLLRANNQIFKNVAQQ---RNMS-VICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVL 260
           + ++++ +  + +N   Q   R+M  +I TPPR ++S  E +     +  G  AIPAWVL
Sbjct: 1   MNSIVQRSCTVIRNTKMQVRYRSMCRMIVTPPRVRISTAEKVGHLVALTAGILAIPAWVL 60

Query: 261 VNIKHYRDK 287
           V++  Y+ K
Sbjct: 61  VHLGDYKKK 69


>UniRef50_Q4TC53 Cluster: Chromosome undetermined SCAF7053, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF7053,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 176

 Score = 37.1 bits (82), Expect = 0.092
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +3

Query: 129 KNVAQQRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLVNIKHYRDK 287
           K V ++    +   PPRNK+   +  F+  +  V   A  AW+L ++  YR +
Sbjct: 117 KQVVKELRRKIYSKPPRNKIGAAQSFFVMSVFTVVMLAPAAWILHHLPEYRQR 169


>UniRef50_Q692Y6 Cluster: Mitochondrial cytochrome c oxidase subunit
           VIII-H; n=1; Branchiostoma belcheri tsingtauense|Rep:
           Mitochondrial cytochrome c oxidase subunit VIII-H -
           Branchiostoma belcheri tsingtauense
          Length = 71

 Score = 35.5 bits (78), Expect = 0.28
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 144 QRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLVNIKHYRDKQ 290
           Q+   ++  P +N +S  +    A  ++ G   IP W+L N+K Y+ K+
Sbjct: 23  QQRAGIMSEPAKNPMSSTDKAIGATAILAGVMGIPVWILCNLKRYQGKE 71


>UniRef50_UPI0000515C5B Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 70

 Score = 35.1 bits (77), Expect = 0.37
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +3

Query: 84  MFGIRNLLRANNQIFKNVAQQRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLV 263
           MF ++ +             Q   S + TPPR +VS  E +     + VG  AIP ++  
Sbjct: 1   MFAVQKIANGAPLALNLYKTQCRTSFLGTPPRVRVSFTEKMLHGVALYVGLMAIPLYIAC 60

Query: 264 NIKHY 278
           N+K+Y
Sbjct: 61  NVKNY 65


>UniRef50_A7PW36 Cluster: Chromosome chr8 scaffold_34, whole genome
           shotgun sequence; n=15; Magnoliophyta|Rep: Chromosome
           chr8 scaffold_34, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 1116

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = -3

Query: 299 IILLLVAVMLDVDQHPGWDSRPAHHHQAGEEDHLTSG----NLVSWRSADNAHVPLLSDI 132
           +  +L+ ++LD++  P W S    H  AGE  + + G    + +S     N  VP+ S++
Sbjct: 322 LFAILMKMLLDIEDDPVWHSAEEEHEDAGETSNYSVGQECLDRLSISLGGNTIVPVASEL 381

Query: 131 L 129
           L
Sbjct: 382 L 382


>UniRef50_A6DHX9 Cluster: Serine/threonine protein kinase; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Serine/threonine
           protein kinase - Lentisphaera araneosa HTCC2155
          Length = 740

 Score = 32.7 bits (71), Expect = 2.0
 Identities = 21/84 (25%), Positives = 38/84 (45%)
 Frame = -3

Query: 308 FFVIILLLVAVMLDVDQHPGWDSRPAHHHQAGEEDHLTSGNLVSWRSADNAHVPLLSDIL 129
           FF++++++++ +  +          AH  +A E +    GNL  + SA      +  +  
Sbjct: 361 FFLLLIIVLSSLFIIQLQDSEQQARAHEQEAREHEKEAVGNLKRFESAREERQQVRREKN 420

Query: 128 KDLVVSAK*IPNSKHFVLVQLFFE 57
           K L  SA  I N +H   V L +E
Sbjct: 421 KLLRESAPIILNGQHLYQVDLQYE 444


>UniRef50_Q9LSL5 Cluster: Receptor protein kinase-like protein; n=3;
           Arabidopsis thaliana|Rep: Receptor protein kinase-like
           protein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 675

 Score = 32.7 bits (71), Expect = 2.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -3

Query: 287 LVAVMLDVDQHPGWDSRPAHHHQAGEEDHLTSGNLVSWRSADNA 156
           LV V  D   +PGWD      H     + L S N  SW ++ ++
Sbjct: 153 LVHVEFDTFNNPGWDPNDVGSHVGINNNSLVSSNYTSWNASSHS 196


>UniRef50_Q8NTE9 Cluster: Hypothetical membrane protein; n=1;
           Corynebacterium glutamicum|Rep: Hypothetical membrane
           protein - Corynebacterium glutamicum (Brevibacterium
           flavum)
          Length = 390

 Score = 32.3 bits (70), Expect = 2.6
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +3

Query: 195 GEMIFLAGLMVVGWSAIPAWV 257
           GEM F  GL+++G+S IPAW+
Sbjct: 11  GEMHFWQGLLIIGFSFIPAWL 31


>UniRef50_A1RFG2 Cluster: Fumarate reductase/succinate dehydrogenase
           flavoprotein domain protein precursor; n=7;
           Shewanella|Rep: Fumarate reductase/succinate
           dehydrogenase flavoprotein domain protein precursor -
           Shewanella sp. (strain W3-18-1)
          Length = 555

 Score = 32.3 bits (70), Expect = 2.6
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +2

Query: 137 RSTKEHERYLHSAKKQGFQR*DDLPRRPDGGGLVCYPSLGVGQHQALPRQ 286
           + +KE ++Y  S  + G  R   L R   G G + +  LG+G   A P Q
Sbjct: 3   KESKEIDQYTASVLQNGISRRSFLTRAAVGSGSLAFAGLGIGSASAAPLQ 52


>UniRef50_Q9N5L5 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 368

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 124 IWLLARSKFLIPNILF*YNYSSKCSLKFFYVKLTM 20
           +W    SK+L+PN +F Y  SS C+  + +V L +
Sbjct: 35  LWDRTYSKYLLPNSIFLYKRSSTCTRTYIFVILRL 69


>UniRef50_UPI0000DA3DE3 Cluster: PREDICTED: similar to Daxx-like
           protein CG9537-PA; n=2; Rattus norvegicus|Rep:
           PREDICTED: similar to Daxx-like protein CG9537-PA -
           Rattus norvegicus
          Length = 255

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 167 HSAKKQGFQR*DDLPRRPDGGGLVCYPSLGVGQHQALPRQ-AIKLSQK 307
           H+ ++QG      LPR  D     C P  G+ Q Q  P++ AI L+++
Sbjct: 199 HAPQEQGSVNSSMLPRNRDQSTAACSPRTGISQQQHAPQEPAIALNKR 246


>UniRef50_Q0A5M3 Cluster: Putative uncharacterized protein; n=3;
           Ectothiorhodospiraceae|Rep: Putative uncharacterized
           protein - Alkalilimnicola ehrlichei (strain MLHE-1)
          Length = 403

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 278 VMLDVDQHPGWDSRPAHHHQAGEEDHL 198
           V LD D HP W +RPA    AG   H+
Sbjct: 202 VALDDDDHPQWATRPADEPLAGHVRHI 228


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,514,036
Number of Sequences: 1657284
Number of extensions: 6156141
Number of successful extensions: 16619
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16607
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)