Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7b01
         (418 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC; ...    83   2e-15
UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c oxi...    70   2e-11
UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p...    67   2e-10
UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;...    60   1e-08
UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C, mitoch...    54   1e-06
UniRef50_A7RPT2 Cluster: Predicted protein; n=1; Nematostella ve...    36   0.34 
UniRef50_Q9AW75 Cluster: Putative uncharacterized protein; n=1; ...    33   2.4  
UniRef50_A2R6J5 Cluster: Contig An16c0010, complete genome; n=4;...    33   3.1  
UniRef50_A6EE33 Cluster: Putative uncharacterized protein; n=1; ...    32   5.5  
UniRef50_O04681 Cluster: Pathogenesis-related genes transcriptio...    32   5.5  
UniRef50_Q8BI67 Cluster: Zinc finger protein 473 homolog; n=6; M...    31   7.2  
UniRef50_A6W906 Cluster: Putative uncharacterized protein; n=1; ...    31   9.6  

>UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC;
           n=4; Endopterygota|Rep: Cytochrome c oxidase polypeptide
           VIIC - Aedes aegypti (Yellowfever mosquito)
          Length = 67

 Score = 83.0 bits (196), Expect = 2e-15
 Identities = 37/60 (61%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
 Frame = +3

Query: 129 LGRNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLKK 305
           + R  +TN VR +HS+GGIPGENLPF + NRYKLT  FI++ GSGL AP+ + RHQLLK+
Sbjct: 8   ISRTGMTNLVRYSHSHGGIPGENLPFSLTNRYKLTALFIVFLGSGLGAPFFVLRHQLLKQ 67


>UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c
           oxidase polypeptide VIIc; n=1; Graphocephala
           atropunctata|Rep: Putative mitochondrial cytochrome c
           oxidase polypeptide VIIc - Graphocephala atropunctata
          Length = 65

 Score = 70.1 bits (164), Expect = 2e-11
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = +3

Query: 135 RNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 302
           RN+ T+  R    GGIPG NLPF + N++KLT  F++Y GSG+S P+L+ RH L K
Sbjct: 10  RNLSTSLARRSQPGGIPGVNLPFSLDNKFKLTALFVVYFGSGMSVPFLMLRHSLTK 65


>UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p -
           Drosophila melanogaster (Fruit fly)
          Length = 66

 Score = 66.9 bits (156), Expect = 2e-10
 Identities = 29/62 (46%), Positives = 41/62 (66%)
 Frame = +3

Query: 120 SNKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLL 299
           S+ + RN   + VR   +GG+PGENLPF + N+Y++T  F +    G  +P+LI RHQLL
Sbjct: 5   SSVIARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLIVRHQLL 64

Query: 300 KK 305
           KK
Sbjct: 65  KK 66


>UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 71

 Score = 60.5 bits (140), Expect = 1e-08
 Identities = 27/47 (57%), Positives = 33/47 (70%)
 Frame = +3

Query: 162 NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 302
           +H   G PG NLP +I NRY LT  FIL+ GSGLS P+L+ R+ LLK
Sbjct: 25  DHGPEGYPGANLPINIQNRYVLTATFILFFGSGLSLPFLVLRYHLLK 71


>UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C,
           mitochondrial precursor; n=46; Deuterostomia|Rep:
           Cytochrome c oxidase subunit 7C, mitochondrial precursor
           - Homo sapiens (Human)
          Length = 63

 Score = 54.0 bits (124), Expect = 1e-06
 Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +3

Query: 135 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 302
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P+L+ RHQLLK
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62


>UniRef50_A7RPT2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 78

 Score = 35.9 bits (79), Expect = 0.34
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 183 PGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 302
           PG N+PF   N+ +L +  + Y G+  + P++  R Q+ K
Sbjct: 35  PGLNMPFQTQNKTRLLIVMVAYLGTCFALPFVAVRFQMAK 74


>UniRef50_Q9AW75 Cluster: Putative uncharacterized protein; n=1;
           Guillardia theta|Rep: Putative uncharacterized protein -
           Guillardia theta (Cryptomonas phi)
          Length = 731

 Score = 33.1 bits (72), Expect = 2.4
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +3

Query: 24  TVLFAKSNFCFLL*YLLENRRNVKMITPLTRISNKLGRNVVTN 152
           ++LF+   + FLL      R N+ +I   +++SNKL +NVV N
Sbjct: 267 SILFSLKKWIFLLKKTEYMRNNIILILTFSKLSNKLNKNVVYN 309


>UniRef50_A2R6J5 Cluster: Contig An16c0010, complete genome; n=4;
           Trichocomaceae|Rep: Contig An16c0010, complete genome -
           Aspergillus niger
          Length = 711

 Score = 32.7 bits (71), Expect = 3.1
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = -1

Query: 208 MSKGRFSPGIPPLEWFLTKFVTTFLPNLFEMRVNGVIIFTFLRFSSRYHSKKQKFDFANS 29
           +S    +P I  + WF   F  + +P  F  +  G  I     +   YHS  Q +   NS
Sbjct: 400 VSGAHLNPTITIMLWFYRGFPKSKMPEYFAAQFLGAFIAALAAYGLYYHS-IQHYLLTNS 458

Query: 28  TVGIL 14
           T GI+
Sbjct: 459 TTGII 463


>UniRef50_A6EE33 Cluster: Putative uncharacterized protein; n=1;
           Pedobacter sp. BAL39|Rep: Putative uncharacterized
           protein - Pedobacter sp. BAL39
          Length = 204

 Score = 31.9 bits (69), Expect = 5.5
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +3

Query: 120 SNKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGL 263
           +NKL  ++  NF+ N    G   EN+   IH  Y L L F++Y+ + L
Sbjct: 101 ANKLASHIFNNFISNWEEDGY--ENIVHGIHYMY-LNLRFVMYSAAQL 145


>UniRef50_O04681 Cluster: Pathogenesis-related genes transcriptional
           activator PTI5; n=1; Solanum lycopersicum|Rep:
           Pathogenesis-related genes transcriptional activator
           PTI5 - Solanum lycopersicum (Tomato) (Lycopersicon
           esculentum)
          Length = 161

 Score = 31.9 bits (69), Expect = 5.5
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +3

Query: 183 PGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLKK 305
           P  +LP + ++  ++ LY +L   + L+ PYL  R+QLL +
Sbjct: 5   PQSDLPLNENDSQEMVLYEVLNEANALNIPYLPQRNQLLPR 45


>UniRef50_Q8BI67 Cluster: Zinc finger protein 473 homolog; n=6;
           Murinae|Rep: Zinc finger protein 473 homolog - Mus
           musculus (Mouse)
          Length = 892

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -2

Query: 258 QSPHIG*NTMSACNGCECRRVDSRQEYRR*NGFSRNSLPHFCPICLR 118
           Q PH      S C    CRR D  +  R  +GF     PH CP+C R
Sbjct: 485 QKPH----KCSECGKAFCRRTDLTEHQRVHSGFR----PHQCPVCAR 523


>UniRef50_A6W906 Cluster: Putative uncharacterized protein; n=1;
           Kineococcus radiotolerans SRS30216|Rep: Putative
           uncharacterized protein - Kineococcus radiotolerans
           SRS30216
          Length = 797

 Score = 31.1 bits (67), Expect = 9.6
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +2

Query: 197 TLRHSQPLQADIVF---HPICGLWTISTLSHHPSPA 295
           TLRH   L AD++     P+    T  TL HHP PA
Sbjct: 195 TLRHDDALPADVLCFTREPLLDASTTVTLHHHPRPA 230


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,953,382
Number of Sequences: 1657284
Number of extensions: 7592227
Number of successful extensions: 17039
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17038
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)