Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7a24
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012163-1|AAH12163.1| 112|Homo sapiens mitochondrial ribosomal... 57 5e-08
AK123603-1|BAC85658.1| 143|Homo sapiens protein ( Homo sapiens ... 33 0.99
Y12395-1|CAA73027.1| 608|Homo sapiens interferon-related IFRD2 ... 30 7.0
U73167-4|AAC02728.1| 442|Homo sapiens interferon-related putati... 30 7.0
U09585-1|AAC16924.1| 441|Homo sapiens interferon-related putati... 30 7.0
BT019999-1|AAV38802.1| 442|Homo sapiens interferon-related deve... 30 7.0
BC007437-1|AAH07437.3| 442|Homo sapiens interferon-related deve... 30 7.0
BC007265-1|AAH07265.1| 442|Homo sapiens interferon-related deve... 30 7.0
BC001676-1|AAH01676.1| 442|Homo sapiens interferon-related deve... 30 7.0
BC001327-1|AAH01327.1| 442|Homo sapiens interferon-related deve... 30 7.0
AK126604-1|BAC86609.1| 210|Homo sapiens protein ( Homo sapiens ... 30 9.2
AB065892-1|BAC06108.1| 347|Homo sapiens seven transmembrane hel... 30 9.2
>BC012163-1|AAH12163.1| 112|Homo sapiens mitochondrial ribosomal
protein L53 protein.
Length = 112
Score = 57.2 bits (132), Expect = 5e-08
Identities = 32/97 (32%), Positives = 50/97 (51%)
Frame = +2
Query: 116 LKAVNLKAAKKITIKFDPFGENATHTRNFAHYISAPKIAITNPNCSVKTEVLCDRSEPTV 295
L + L+ K++ ++F PF +N TR F +S+ K+ TN NCSV +V D SEP V
Sbjct: 5 LARLGLRPVKQVRVQFCPFEKNVESTRTFLQTVSSEKVRSTNLNCSVIADVRHDGSEPCV 64
Query: 296 EITLLPAIAATAKIQKVTLRSENLTCLEILQLLNKHI 406
++ ++ +R +LT LE+L HI
Sbjct: 65 DVLF-------GDGHRLIMRGAHLTALEMLTAFASHI 94
>AK123603-1|BAC85658.1| 143|Homo sapiens protein ( Homo sapiens
cDNA FLJ41609 fis, clone CTONG3001560. ).
Length = 143
Score = 33.1 bits (72), Expect = 0.99
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 552 IY*CILRRHILCFCYVFCVVYNFSCLCFVQVH 647
++ C +R +LC C C+V +C CFV VH
Sbjct: 70 VFSCCVRVLVLCVCTHVCLVTVCACACFVCVH 101
>Y12395-1|CAA73027.1| 608|Homo sapiens interferon-related IFRD2
(PC4-B) protein protein.
Length = 608
Score = 30.3 bits (65), Expect = 7.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 250 AIGICDCYFRCTDVMSKIPCVSCVFSKWIKFYG 152
A+G+ CY D+ + C++C+ S + +FYG
Sbjct: 352 ALGL-GCYVAAADIQDLVSCLACLESVFSRFYG 383
>U73167-4|AAC02728.1| 442|Homo sapiens interferon-related putative
protein protein.
Length = 442
Score = 30.3 bits (65), Expect = 7.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 250 AIGICDCYFRCTDVMSKIPCVSCVFSKWIKFYG 152
A+G+ CY D+ + C++C+ S + +FYG
Sbjct: 186 ALGL-GCYVAAADIQDLVSCLACLESVFSRFYG 217
>U09585-1|AAC16924.1| 441|Homo sapiens interferon-related putative
protein protein.
Length = 441
Score = 30.3 bits (65), Expect = 7.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 250 AIGICDCYFRCTDVMSKIPCVSCVFSKWIKFYG 152
A+G+ CY D+ + C++C+ S + +FYG
Sbjct: 185 ALGL-GCYVAAADIQDLVSCLACLESVFSRFYG 216
>BT019999-1|AAV38802.1| 442|Homo sapiens interferon-related
developmental regulator 2 protein.
Length = 442
Score = 30.3 bits (65), Expect = 7.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 250 AIGICDCYFRCTDVMSKIPCVSCVFSKWIKFYG 152
A+G+ CY D+ + C++C+ S + +FYG
Sbjct: 186 ALGL-GCYVAAADIQDLVSCLACLESVFSRFYG 217
>BC007437-1|AAH07437.3| 442|Homo sapiens interferon-related
developmental regulator 2 protein.
Length = 442
Score = 30.3 bits (65), Expect = 7.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 250 AIGICDCYFRCTDVMSKIPCVSCVFSKWIKFYG 152
A+G+ CY D+ + C++C+ S + +FYG
Sbjct: 186 ALGL-GCYVAAADIQDLVSCLACLESVFSRFYG 217
>BC007265-1|AAH07265.1| 442|Homo sapiens interferon-related
developmental regulator 2 protein.
Length = 442
Score = 30.3 bits (65), Expect = 7.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 250 AIGICDCYFRCTDVMSKIPCVSCVFSKWIKFYG 152
A+G+ CY D+ + C++C+ S + +FYG
Sbjct: 186 ALGL-GCYVAAADIQDLVSCLACLESVFSRFYG 217
>BC001676-1|AAH01676.1| 442|Homo sapiens interferon-related
developmental regulator 2 protein.
Length = 442
Score = 30.3 bits (65), Expect = 7.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 250 AIGICDCYFRCTDVMSKIPCVSCVFSKWIKFYG 152
A+G+ CY D+ + C++C+ S + +FYG
Sbjct: 186 ALGL-GCYVAAADIQDLVSCLACLESVFSRFYG 217
>BC001327-1|AAH01327.1| 442|Homo sapiens interferon-related
developmental regulator 2 protein.
Length = 442
Score = 30.3 bits (65), Expect = 7.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 250 AIGICDCYFRCTDVMSKIPCVSCVFSKWIKFYG 152
A+G+ CY D+ + C++C+ S + +FYG
Sbjct: 186 ALGL-GCYVAAADIQDLVSCLACLESVFSRFYG 217
>AK126604-1|BAC86609.1| 210|Homo sapiens protein ( Homo sapiens
cDNA FLJ44641 fis, clone BRACE2030039. ).
Length = 210
Score = 29.9 bits (64), Expect = 9.2
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 582 LCFCYVFCV-VYNFSCLCFVQVHYHKTCRIDC 674
+C Y +CV V C+C V H H C + C
Sbjct: 43 VCTVYAWCVHVCTVWCVCMVCAHVHCVCMVMC 74
>AB065892-1|BAC06108.1| 347|Homo sapiens seven transmembrane helix
receptor protein.
Length = 347
Score = 29.9 bits (64), Expect = 9.2
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Frame = -2
Query: 328 SCCNCRQECYFYCWLTPVT----QHFGLHRAIGICDCYFRCTDVMSKIPCVSCVFSKWIK 161
S C +CYFY +L V R IC C R T +M C+ V W+
Sbjct: 92 SFAGCITQCYFYFFLGTVEFLLLTVMSYDRYATIC-CPLRYTTIMRPSVCIGTVVFSWV- 149
Query: 160 FYGNFFSSL 134
G F S L
Sbjct: 150 --GGFLSVL 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,425,233
Number of Sequences: 237096
Number of extensions: 1793327
Number of successful extensions: 3754
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3753
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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