Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7a20
(286 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93386-1|CAB07645.1| 442|Caenorhabditis elegans Hypothetical pr... 32 0.058
Z81588-3|CAB04715.2| 377|Caenorhabditis elegans Hypothetical pr... 27 1.6
Z81581-8|CAB04661.2| 244|Caenorhabditis elegans Hypothetical pr... 27 1.6
AL117203-8|CAB55110.1| 376|Caenorhabditis elegans Hypothetical ... 27 2.2
AY241927-1|AAO85276.1| 330|Caenorhabditis elegans beta-1,3-gala... 26 3.8
AF003145-7|AAB57714.2| 352|Caenorhabditis elegans Serpentine re... 26 3.8
AC024746-16|AAF60408.1| 330|Caenorhabditis elegans Squashed vul... 26 3.8
Z81105-5|CAB03218.2| 331|Caenorhabditis elegans Hypothetical pr... 26 5.0
U37429-12|AAA79353.1| 274|Caenorhabditis elegans Alkylguanine d... 25 6.6
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 25 6.6
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 25 6.6
AF067613-11|AAN73862.2| 334|Caenorhabditis elegans Serpentine r... 25 6.6
AC024804-6|AAF60746.1| 162|Caenorhabditis elegans Hypothetical ... 25 6.6
U64853-2|AAB04975.2| 529|Caenorhabditis elegans Hypothetical pr... 25 8.7
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 25 8.7
>Z93386-1|CAB07645.1| 442|Caenorhabditis elegans Hypothetical
protein R11H6.2 protein.
Length = 442
Score = 32.3 bits (70), Expect = 0.058
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 186 VCFIDLFVIMINYKFFVGVNIDSVIRIYNVFICVNVTLIM*RHMV 52
VC I + INY G + I+NV ICV ++L+ MV
Sbjct: 208 VCLIAAVYVFINYAIGDGCGLPKFFVIFNVLICVAISLLSVSPMV 252
>Z81588-3|CAB04715.2| 377|Caenorhabditis elegans Hypothetical
protein T07D10.3 protein.
Length = 377
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -2
Query: 219 CCVSFIDDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNVFIC 88
C F + F+D +++NYK+F+ R Y +++C
Sbjct: 198 CIRHFFEQHYKHLFLDSRHLLLNYKYFLRYQEKQEERAYGLYVC 241
>Z81581-8|CAB04661.2| 244|Caenorhabditis elegans Hypothetical
protein T02E1.6 protein.
Length = 244
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2
Query: 195 FLFVCFIDLFVIMINYKFFVGVN--IDSVIRIYNVFICVNVTLIM 67
FLF+ + +I+I + FFV N I ++ NV I + V LI+
Sbjct: 115 FLFLELVIAMMILITWSFFVENNEMIPIILCFVNVIILIIVVLIL 159
>AL117203-8|CAB55110.1| 376|Caenorhabditis elegans Hypothetical
protein Y48C3A.11 protein.
Length = 376
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 236 MQELYVVASVLSTTSCLFVSSTCS*L*LIINFL 138
M + ++S+L+ T+ +S +CS L L INFL
Sbjct: 41 MLTITTLSSMLNPTNMFLISMSCSQLALCINFL 73
>AY241927-1|AAO85276.1| 330|Caenorhabditis elegans
beta-1,3-galactosyltransferase protein.
Length = 330
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 183 CFIDLFVIMINYKFFVGVNIDSVIRIYNVFI 91
CF+ F +KFF+ +IDS +RI + I
Sbjct: 141 CFVHAFA-NFKFKFFLKTDIDSFVRITPLII 170
>AF003145-7|AAB57714.2| 352|Caenorhabditis elegans Serpentine
receptor, class z protein4 protein.
Length = 352
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/56 (21%), Positives = 30/56 (53%)
Frame = -2
Query: 171 LFVIMINYKFFVGVNIDSVIRIYNVFICVNVTLIM*RHMVFYIYFNTITTIHVKSF 4
+F++ + + +FV + + SV + + + + +I+ F+ F + +I+ KSF
Sbjct: 95 VFIVSLFFAYFVAITVTSVQNVLLFILALRLFMIL-----FFPNFKKVISINQKSF 145
>AC024746-16|AAF60408.1| 330|Caenorhabditis elegans Squashed vulva
protein 2 protein.
Length = 330
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 183 CFIDLFVIMINYKFFVGVNIDSVIRIYNVFI 91
CF+ F +KFF+ +IDS +RI + I
Sbjct: 141 CFVHAFA-NFKFKFFLKTDIDSFVRITPLII 170
>Z81105-5|CAB03218.2| 331|Caenorhabditis elegans Hypothetical
protein R05D7.5 protein.
Length = 331
Score = 25.8 bits (54), Expect = 5.0
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -2
Query: 231 RIVCCCV---SFIDDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNVFICVNVTLIM 67
R+ C C+ SF++ ++VC + F + FFV I + + IC + I+
Sbjct: 18 RLTCFCLLPASFVNRHIYVCIPNSFSPLPTGCFFVVTEISNTYQNRRHMICGAIVTIL 75
>U37429-12|AAA79353.1| 274|Caenorhabditis elegans Alkylguanine dna
alkyltransferaseprotein 2 protein.
Length = 274
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 133 PNKKFIINHNHEQVDETNKQEVVDKTDATTY 225
P + F +H H+ +DE QEV ++ + +
Sbjct: 76 PRESFYSSHEHDPMDEVLLQEVKEEAHSLAF 106
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 25.4 bits (53), Expect = 6.6
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +1
Query: 22 SSNCIKIDVKYHMPLHYQCDINADK 96
+SNCI + +Y++P +C + A++
Sbjct: 356 NSNCIDVSSRYNLPPGRKCSVAANQ 380
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 25.4 bits (53), Expect = 6.6
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +1
Query: 22 SSNCIKIDVKYHMPLHYQCDINADK 96
+SNCI + +Y++P +C + A++
Sbjct: 356 NSNCIDVSSRYNLPPGRKCSVAANQ 380
>AF067613-11|AAN73862.2| 334|Caenorhabditis elegans Serpentine
receptor, class z protein19 protein.
Length = 334
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 138 VGVNIDSVIRIYNVFICVNVTLIM*RHMVFYIYFNTITT 22
+GV D+ I I +FI V TL+ ++F +Y T
Sbjct: 18 IGVKCDNCILINYIFISVFATLVAFNLVLFTLYVYVFKT 56
>AC024804-6|AAF60746.1| 162|Caenorhabditis elegans Hypothetical
protein Y51H7BR.3 protein.
Length = 162
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -2
Query: 108 IYNVFICVNVTLIM*RHMVFYIYFNTITTI 19
I ++F + V + R++ F+IYFN++ T+
Sbjct: 91 ISSIFALIFVLQDLKRYLRFHIYFNSVITL 120
>U64853-2|AAB04975.2| 529|Caenorhabditis elegans Hypothetical
protein K11G9.2 protein.
Length = 529
Score = 25.0 bits (52), Expect = 8.7
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 76 CDINADKNVVNAY--DAIDVDPN-KKFIINHNHEQVDETNKQEVVDKTDATTYNS 231
C+ N + V + Y D ++ N +K I+N DE+ ++++VD + YN+
Sbjct: 333 CEENFKRRVESEYRGDVVENPENVQKNIMNFYTNYCDESEERKLVDYIGHSVYNA 387
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 82 INADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQE 195
+ +N + D +DPNKK +I + +++ NK E
Sbjct: 780 VTTSENCEDIPDPSSIDPNKKTLIIFDDLMLEKQNKIE 817
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.129 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,515,354
Number of Sequences: 27780
Number of extensions: 102356
Number of successful extensions: 260
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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