Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7a18
         (738 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M14162-1|AAB04636.1| 4563|Homo sapiens APOB protein.                   32   2.5  
AL365436-4|CAO03532.1|  335|Homo sapiens tuftelin 1 protein.           31   5.7  

>M14162-1|AAB04636.1| 4563|Homo sapiens APOB protein.
          Length = 4563

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
 Frame = +1

Query: 232  RIRQNEHYHAKNESFLGFCN-LEEIDYYQCLKMQYVLDQNFDNDFILTVYRMANVVTKQV 408
            RI +N+   A +++ + F   L ++  Y     QY+ D    +D  + +   AN++ + +
Sbjct: 2150 RITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAI---ANIIDEII 2206

Query: 409  RPYNSIDEKHHYNTVRNVLILIKNARLVLSNSVKKQYYDDVLNLKKNTDLESYDPLITVF 588
                S+DE  HY+T  N++  I +  L + N    +      +  +N D +         
Sbjct: 2207 EKLKSLDE--HYHTRVNLVKTIHDLHLFIENIDFNKSGSSTASWIQNVDTK--------- 2255

Query: 589  LQIGESINEEIQKLRKALVN 648
             QI   I E++Q+L++ + N
Sbjct: 2256 YQIRIQIQEKLQQLKRHIQN 2275


>AL365436-4|CAO03532.1|  335|Homo sapiens tuftelin 1 protein.
          Length = 335

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 17/73 (23%), Positives = 34/73 (46%)
 Frame = +1

Query: 514 QYYDDVLNLKKNTDLESYDPLITVFLQIGESINEEIQKLRKALVNFFTNKPDKSDINNPD 693
           QY  +V+  K N   +S   L +   ++   INE+++ LRK + +      +    +  D
Sbjct: 79  QYIQEVVLEKPNGFSQSPTALYSSPPEVDTCINEDVESLRKTVQDLLAKLQEAKRQHQSD 138

Query: 694 VVSYQFIFDRVQK 732
            V+++    R Q+
Sbjct: 139 CVAFEVTLSRYQR 151


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,973,435
Number of Sequences: 237096
Number of extensions: 2006235
Number of successful extensions: 3856
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3856
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)