Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7a01
         (667 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           26   0.93 
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   8.7  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.7  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    23   8.7  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 26.2 bits (55), Expect = 0.93
 Identities = 14/61 (22%), Positives = 31/61 (50%)
 Frame = -2

Query: 186 KRLQVMIEYIKRTNADEPTPNVIGYVSDITQNTYTVTWFNTVDLSTYQESVHDDRNEIFD 7
           + L+++I  I + + ++   N    +   T +T  + WF  V  +  Q S+ +DR  +F+
Sbjct: 735 RELELLISGISKIDVNDWKANT--RLKQCTADTPQIVWFWQVSSTDLQLSMSEDRLHVFN 792

Query: 6   F 4
           +
Sbjct: 793 W 793


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -1

Query: 268 RVCHFSYNSVYFNLFG 221
           R+CHFS+   ++++ G
Sbjct: 60  RICHFSWTMEHYHVMG 75


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +2

Query: 566 TKIYRPDNNKTDAAVNTSSPKRAVETENDDDDDE 667
           TK    +NN +D     +S        + DDDDE
Sbjct: 758 TKADNMNNNHSDQLTGDNSADERAVPNDADDDDE 791


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +2

Query: 308 NSEDENVLDFIIEDEYYLKKRGVGAHIIKVASSPQLRLLYK 430
           N  +E+ +  + E  + +   G+G H++     P L  +YK
Sbjct: 331 NDINEDTILSLNEQGHKIDCFGIGTHLVTCQRQPALGCVYK 371


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,565
Number of Sequences: 2352
Number of extensions: 12157
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)