Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7a01
(667 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical pr... 31 0.73
U39744-3|AAK18884.2| 563|Caenorhabditis elegans Hypothetical pr... 31 0.97
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 29 2.2
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 29 2.2
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 29 2.2
Z93393-19|CAC70107.3| 971|Caenorhabditis elegans Hypothetical p... 29 3.0
Z93393-14|CAD59174.1| 155|Caenorhabditis elegans Hypothetical p... 29 3.0
Z83229-4|CAD89896.1| 971|Caenorhabditis elegans Hypothetical pr... 29 3.0
U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical pr... 29 3.9
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 29 3.9
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical ... 29 3.9
U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical p... 28 5.2
U28991-9|AAU05576.1| 484|Caenorhabditis elegans Hypothetical pr... 28 5.2
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 28 5.2
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 28 5.2
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 28 5.2
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 28 5.2
AL117195-4|CAB55010.1| 571|Caenorhabditis elegans Hypothetical ... 28 6.8
>Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical
protein W04D2.2a protein.
Length = 332
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 384 ILSRWLARRNLDCCTKTPILQCRAATIVFCAIWCKTANTIL 506
IL+ WLA + CT I+ +V CA+WC + T L
Sbjct: 84 ILTGWLAMKGAVYCTHPNIIYISG--MVVCALWCSSCMTAL 122
>U39744-3|AAK18884.2| 563|Caenorhabditis elegans Hypothetical
protein C03F11.3 protein.
Length = 563
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2
Query: 123 VIGYVSDITQNTYTVTWFNTVDLSTYQESVHDDRNEI 13
V+G +D T N++T +W N+ +ST Q V+D N I
Sbjct: 47 VLGLNADGTLNSFTDSWVNSKYISTMQYWVYDYTNTI 83
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 142 CVGALYIFNHYLEPLGVSRFVKFKINCQIN*SKRYYKKNGKHEQHYARHHCERPNQ 309
CV L+IF+ ++ PLG F + I+ N SKRY +++ K+ + E P +
Sbjct: 7 CVALLFIFSAFITPLG---FFYYTIS---NESKRYSEESEKNYGYQTLEFTESPEE 56
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 142 CVGALYIFNHYLEPLGVSRFVKFKINCQIN*SKRYYKKNGKHEQHYARHHCERPNQ 309
CV L+IF+ ++ PLG F + I+ N SKRY +++ K+ + E P +
Sbjct: 7 CVALLFIFSAFITPLG---FFYYTIS---NESKRYSEESEKNYGYQTLEFTESPEE 56
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 142 CVGALYIFNHYLEPLGVSRFVKFKINCQIN*SKRYYKKNGKHEQHYARHHCERPNQ 309
CV L+IF+ ++ PLG F + I+ N SKRY +++ K+ + E P +
Sbjct: 7 CVALLFIFSAFITPLG---FFYYTIS---NESKRYSEESEKNYGYQTLEFTESPEE 56
>Z93393-19|CAC70107.3| 971|Caenorhabditis elegans Hypothetical
protein Y48E1B.14a protein.
Length = 971
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 503 LNAIMFNCAEIKLNKGQMLFQTKIYRPDNNKTDAAVNTSSPKRAVETENDDDDD 664
L I+F + + G+ML+Q K Y + + TSS K E +DDDDD
Sbjct: 46 LAGILFAKWVFECSNGEMLYQWKDY------FNPSATTSSRKPEAEEADDDDDD 93
>Z93393-14|CAD59174.1| 155|Caenorhabditis elegans Hypothetical
protein Y48E1B.14b protein.
Length = 155
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 503 LNAIMFNCAEIKLNKGQMLFQTKIYRPDNNKTDAAVNTSSPKRAVETENDDDDD 664
L I+F + + G+ML+Q K Y + + TSS K E +DDDDD
Sbjct: 45 LAGILFAKWVFECSNGEMLYQWKDY------FNPSATTSSRKPEAEEADDDDDD 92
>Z83229-4|CAD89896.1| 971|Caenorhabditis elegans Hypothetical
protein Y48E1B.14a protein.
Length = 971
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 503 LNAIMFNCAEIKLNKGQMLFQTKIYRPDNNKTDAAVNTSSPKRAVETENDDDDD 664
L I+F + + G+ML+Q K Y + + TSS K E +DDDDD
Sbjct: 46 LAGILFAKWVFECSNGEMLYQWKDY------FNPSATTSSRKPEAEEADDDDDD 93
>U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical
protein D1044.2b protein.
Length = 501
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 491 GEYDLNAIMFNCAEIKLNKGQMLFQTKIYRPDNNKTDAAVNTSSPKRAVETENDDDDD 664
G +D A+ FN ++K L TK RP+ + T + S R +ET +D+++
Sbjct: 260 GSFDGEAVKFNEELEAIDKA--LQTTKKQRPELSVTPQPEDLSGDARVIETTEEDEEE 315
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
protein D1044.2c protein.
Length = 1090
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 491 GEYDLNAIMFNCAEIKLNKGQMLFQTKIYRPDNNKTDAAVNTSSPKRAVETENDDDDD 664
G +D A+ FN ++K L TK RP+ + T + S R +ET +D+++
Sbjct: 810 GSFDGEAVKFNEELEAIDKA--LQTTKKQRPELSVTPQPEDLSGDARVIETTEEDEEE 865
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
protein D1044.2a protein.
Length = 1051
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 491 GEYDLNAIMFNCAEIKLNKGQMLFQTKIYRPDNNKTDAAVNTSSPKRAVETENDDDDD 664
G +D A+ FN ++K L TK RP+ + T + S R +ET +D+++
Sbjct: 810 GSFDGEAVKFNEELEAIDKA--LQTTKKQRPELSVTPQPEDLSGDARVIETTEEDEEE 865
>AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical
protein Y57A10A.7 protein.
Length = 732
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 539 LNKGQMLFQTKIYRPDNNKTDAAVNTSSPKRAVETENDDDDD 664
L +G + K R +K ++ SPKRA +E DDDD+
Sbjct: 385 LRRGAYYRRLKTGRKSISKFSGMEHSRSPKRARISERDDDDE 426
>U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical
protein F08F8.10a protein.
Length = 487
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 120 IGYVSDITQNTYTVTWFNTVDLSTYQESVHDDRNEIFDFF 1
IG S + QN+Y + D S + S HD + DF+
Sbjct: 356 IGRRSQLEQNSYASQYCGRSDYSNHHSSYHDSHHPQDDFY 395
>U28991-9|AAU05576.1| 484|Caenorhabditis elegans Hypothetical
protein F08F8.10b protein.
Length = 484
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 120 IGYVSDITQNTYTVTWFNTVDLSTYQESVHDDRNEIFDFF 1
IG S + QN+Y + D S + S HD + DF+
Sbjct: 353 IGRRSQLEQNSYASQYCGRSDYSNHHSSYHDSHHPQDDFY 392
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 117 GYVSDITQNTYTVTWFNTVDLSTYQESVHDDRNEIFD 7
GYVSD NTY + N +T +H+ +E FD
Sbjct: 272 GYVSDPVTNTYAIV-TNFYQHNTLYHRIHEQLSEDFD 307
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 117 GYVSDITQNTYTVTWFNTVDLSTYQESVHDDRNEIFD 7
GYVSD NTY + N +T +H+ +E FD
Sbjct: 312 GYVSDPVTNTYAIV-TNFYQHNTLYHRIHEQLSEDFD 347
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 117 GYVSDITQNTYTVTWFNTVDLSTYQESVHDDRNEIFD 7
GYVSD NTY + N +T +H+ +E FD
Sbjct: 272 GYVSDPVTNTYAIV-TNFYQHNTLYHRIHEQLSEDFD 307
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 117 GYVSDITQNTYTVTWFNTVDLSTYQESVHDDRNEIFD 7
GYVSD NTY + N +T +H+ +E FD
Sbjct: 312 GYVSDPVTNTYAIV-TNFYQHNTLYHRIHEQLSEDFD 347
>AL117195-4|CAB55010.1| 571|Caenorhabditis elegans Hypothetical
protein Y57A10A.5 protein.
Length = 571
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 587 NNKTDAAVNTSSPKRAVETENDDDD 661
++K+D+ ++SPKRA +E+DDD+
Sbjct: 293 SDKSDSDEYSTSPKRARASESDDDE 317
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,310,223
Number of Sequences: 27780
Number of extensions: 284808
Number of successful extensions: 1041
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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