Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6p19
         (556 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010320-1|AAQ23638.1|  335|Drosophila melanogaster AT04665p pro...    28   9.7  
BT003289-1|AAO25049.1|  458|Drosophila melanogaster GM03563p pro...    28   9.7  
AE014296-498|AAF47674.1|  458|Drosophila melanogaster CG12186-PA...    28   9.7  

>BT010320-1|AAQ23638.1|  335|Drosophila melanogaster AT04665p
           protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 444 SRSHEYNYVLNNGSTELCQETSCG 373
           S SHEY+YV   G   L Q +SCG
Sbjct: 90  SVSHEYHYVSPVGEDNLLQCSSCG 113


>BT003289-1|AAO25049.1|  458|Drosophila melanogaster GM03563p
           protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 444 SRSHEYNYVLNNGSTELCQETSCG 373
           S SHEY+YV   G   L Q +SCG
Sbjct: 213 SVSHEYHYVSPVGEDNLLQCSSCG 236


>AE014296-498|AAF47674.1|  458|Drosophila melanogaster CG12186-PA
           protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 444 SRSHEYNYVLNNGSTELCQETSCG 373
           S SHEY+YV   G   L Q +SCG
Sbjct: 213 SVSHEYHYVSPVGEDNLLQCSSCG 236


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,936,227
Number of Sequences: 53049
Number of extensions: 445634
Number of successful extensions: 963
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)