Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6p18
         (386 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2; ...    34   0.83 
UniRef50_Q73R85 Cluster: Surface antigen, putative; n=1; Trepone...    33   2.5  
UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;...    33   2.5  
UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1; ...    32   3.3  
UniRef50_Q6MG59 Cluster: Protein G6b precursor; n=23; Eutheria|R...    32   4.4  
UniRef50_UPI0000E497DB Cluster: PREDICTED: similar to egg bindin...    31   5.8  
UniRef50_Q2U832 Cluster: Predicted protein; n=7; Trichocomaceae|...    31   5.8  
UniRef50_A5E7L8 Cluster: Predicted protein; n=1; Lodderomyces el...    31   5.8  
UniRef50_UPI0000499A59 Cluster: importin alpha; n=1; Entamoeba h...    31   7.7  
UniRef50_A7TTU4 Cluster: Putative uncharacterized protein; n=1; ...    31   7.7  

>UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2;
           Dikarya|Rep: Putative uncharacterized protein - Ustilago
           maydis (Smut fungus)
          Length = 353

 Score = 34.3 bits (75), Expect = 0.83
 Identities = 22/54 (40%), Positives = 28/54 (51%)
 Frame = +1

Query: 178 DGGCGGRNISLYLVERKEGSPTARSSRRESAKIVAEHSAAEK*FCSQNNTYVYT 339
           D GCG  ++SLYL ER   S     S   + KI  +  AAE+ F   NN  V+T
Sbjct: 125 DLGCGWGSLSLYLAERYPNSRIYALSNSRTQKIYIDSIAAERGF---NNLEVHT 175


>UniRef50_Q73R85 Cluster: Surface antigen, putative; n=1; Treponema
           denticola|Rep: Surface antigen, putative - Treponema
           denticola
          Length = 618

 Score = 32.7 bits (71), Expect = 2.5
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 116 SSQNGNLFVATKNDNDCDGTLCTVQIENETK 24
           S +NG  +V  + +N  D  +CT+Q  N+ K
Sbjct: 571 SEENGRFYVVDRRENSTDNNICTIQQVNDAK 601


>UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;
           n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
           finger-containing protein - Dictyostelium discoideum AX4
          Length = 774

 Score = 32.7 bits (71), Expect = 2.5
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -2

Query: 313 NKIIFPLHYVLLLSSPIRALSSVRWGNLPFFPPS-KEKCSDRHNRH 179
           NK + P  Y  + SSP+   S+   GNL F   S  ++  D HN H
Sbjct: 689 NKSVLPSIYSSMQSSPLSTSSTTSKGNLSFLVSSNNDEDDDHHNHH 734


>UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1;
           Pelodictyon luteolum DSM 273|Rep: Putative
           uncharacterized protein - Pelodictyon luteolum (strain
           DSM 273) (Chlorobium luteolum (strain DSM273))
          Length = 427

 Score = 32.3 bits (70), Expect = 3.3
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 325 YYFANKIIFPLHYVLLLSSPIRALSSVRWGNLPF 224
           Y FANK +F ++Y+L+ S  I  L SV +G + F
Sbjct: 74  YPFANKPVFWVYYILIFSIGIGILHSVAYGAIAF 107


>UniRef50_Q6MG59 Cluster: Protein G6b precursor; n=23; Eutheria|Rep:
           Protein G6b precursor - Rattus norvegicus (Rat)
          Length = 232

 Score = 31.9 bits (69), Expect = 4.4
 Identities = 17/66 (25%), Positives = 25/66 (37%)
 Frame = +2

Query: 50  CKVFHHNHCRFSLPQINCHFAMTKNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWWKER 229
           CK    N  R  +  +        + ++ GS  S      LG   V+ +G     WW+  
Sbjct: 106 CKGRQENESRTVIQVLGDKAGCRPSGSTHGSEYSKVLIPLLGFGLVLGLGALGLVWWRRS 165

Query: 230 KVPPPH 247
            VPP H
Sbjct: 166 CVPPSH 171


>UniRef50_UPI0000E497DB Cluster: PREDICTED: similar to egg bindin
           receptor 1 precursor; n=3; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to egg bindin
           receptor 1 precursor - Strongylocentrotus purpuratus
          Length = 1228

 Score = 31.5 bits (68), Expect = 5.8
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
 Frame = +2

Query: 38  QSVPCKVFHHNHCRFSLPQINCHFAMTKNSNSQGSNTSAANAIALGAMAVVAVG--TFLF 211
           Q + C  + H+   F+LPQ NCH   +  S     +   +N         V+ G  +   
Sbjct: 18  QILVCDSYAHDTSNFNLPQHNCHRQWSSGSLGANGSPEISNCPDSTVEVTVSAGVTSLNV 77

Query: 212 TWWKERKVPPPHGA 253
           TW     V P  GA
Sbjct: 78  TWTIPTAVDPNGGA 91


>UniRef50_Q2U832 Cluster: Predicted protein; n=7;
           Trichocomaceae|Rep: Predicted protein - Aspergillus
           oryzae
          Length = 398

 Score = 31.5 bits (68), Expect = 5.8
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 116 TKNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWWKERK 232
           ++ S+S GSN  A     +G +A VA+ TFL  W+  RK
Sbjct: 23  SQGSSSGGSNVGAIAGGVVGGVAAVALITFLVWWFFVRK 61


>UniRef50_A5E7L8 Cluster: Predicted protein; n=1; Lodderomyces
           elongisporus NRRL YB-4239|Rep: Predicted protein -
           Lodderomyces elongisporus (Yeast) (Saccharomyces
           elongisporus)
          Length = 344

 Score = 31.5 bits (68), Expect = 5.8
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = +2

Query: 80  FSLPQINCHFAMTKNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWWKERKVPPPHGAQG 259
           F + Q     + +K++N QGS+ S  N+  LGA AV  VG++L +    +  P  + + G
Sbjct: 99  FVMNQAMSSMSGSKHNNYQGSSNSGLNSAGLGA-AVSMVGSYLASHSSGQNKPAGNNSSG 157


>UniRef50_UPI0000499A59 Cluster: importin alpha; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: importin alpha - Entamoeba
           histolytica HM-1:IMSS
          Length = 478

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +1

Query: 34  FSICTVQSVPSQSLSFFVAT--NKLPFCDDQE 123
           FSICT QS+PSQ L   + +  N   FCDD +
Sbjct: 400 FSICTEQSLPSQLLIITLKSIRNVCRFCDDNK 431


>UniRef50_A7TTU4 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 319

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +2

Query: 23  VLSRFQSVPCKVFHHNHCRFSLPQINCHFAMTKNSNSQGSNTSA 154
           V++   S+PCK +   +C+F     N H       N +  +TS+
Sbjct: 60  VINSANSIPCKYYQKGNCKFGSNCANLHIDPPSQENQKSFSTSS 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,305,144
Number of Sequences: 1657284
Number of extensions: 7079616
Number of successful extensions: 19397
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19391
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)