Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6p15
         (136 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    21   7.0  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    20   9.3  

>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 128 LTLCVCVFYLSHKMDVWQK 72
           LTL   V+++  ++  W+K
Sbjct: 8   LTLLAAVYWIRQRLAYWEK 26


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 94  IKWTSGKNHNQY*CFFLTLRDST 26
           I WT   NH    C+++  R  T
Sbjct: 93  IMWTREMNHYVIRCYYVYTRMET 115


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,086
Number of Sequences: 2352
Number of extensions: 838
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 24
effective length of database: 507,531
effective search space used: 10150620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)