Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6p09
         (529 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VP96 Cluster: CG10589-PA; n=3; Sophophora|Rep: CG1058...    32   9.4  
UniRef50_Q24F96 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  
UniRef50_Q22KE2 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  

>UniRef50_Q9VP96 Cluster: CG10589-PA; n=3; Sophophora|Rep:
           CG10589-PA - Drosophila melanogaster (Fruit fly)
          Length = 386

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +1

Query: 136 INVINVCIGMVETLKIIIQ--NITFQVVLKSLKQF*KFINDEAHVPTKKKL*RDK 294
           + ++  C+  +E L+ ++Q  N+TF   ++ L+       D+ H+P  KK  RD+
Sbjct: 198 LEIVKQCVVEIEGLRTLVQEYNLTFLGTMEELQDMLDSKLDKVHMPALKKYIRDR 252


>UniRef50_Q24F96 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2008

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 12   VLSEIKYLKFTL*LQIFN-ICTKCDEVYF*KANLNSTIIKCGNKCN*CMY 158
            ++SEI Y    L    F  IC +C + Y    +L S + +CGN C  C Y
Sbjct: 1459 LISEINYDPTQLDYYNFILICQQCQQTYMVSYDLQSCL-QCGNNCQRCQY 1507


>UniRef50_Q22KE2 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1643

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 63  NICTKCDEVYF*KANLNSTII-KCGNKCN*C 152
           N CT+C + YF + N  +T+  KC  +CN C
Sbjct: 528 NECTECADQYFLQKNFQNTLCQKCPEQCNSC 558


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,093,138
Number of Sequences: 1657284
Number of extensions: 5710691
Number of successful extensions: 11438
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11434
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)