Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6p04
         (319 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    26   0.11 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    26   0.11 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    26   0.11 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   0.44 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   1.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   1.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   2.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   5.5  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   5.5  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    19   9.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    19   9.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    19   9.5  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 25.8 bits (54), Expect = 0.11
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = -2

Query: 294 YIIINWNIPMSLLNNLITKSIIILWGLNFVVNIFAALTLRGLLYNIFKIPKTTLWMHNQK 115
           + ++++NI M+L+   IT     +W  N   ++F  L    L Y   ++   T  M   K
Sbjct: 203 FSLMDYNIVMALVLQFITLQHTFIWVFN---DVFVMLLSTALAYRFTQVTDRTQSMSESK 259


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 25.8 bits (54), Expect = 0.11
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = -2

Query: 294 YIIINWNIPMSLLNNLITKSIIILWGLNFVVNIFAALTLRGLLYNIFKIPKTTLWMHNQK 115
           + ++++NI M+L+   IT     +W  N   ++F  L    L Y   ++   T  M   K
Sbjct: 203 FSLMDYNIVMALVLQFITLQHTFIWVFN---DVFVMLLSTALAYRFTQVTDRTQSMSESK 259


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 25.8 bits (54), Expect = 0.11
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = -2

Query: 294 YIIINWNIPMSLLNNLITKSIIILWGLNFVVNIFAALTLRGLLYNIFKIPKTTLWMHNQK 115
           + ++++NI M+L+   IT     +W  N   ++F  L    L Y   ++   T  M   K
Sbjct: 203 FSLMDYNIVMALVLQFITLQHTFIWVFN---DVFVMLLSTALAYRFTQVTDRTQSMSESK 259


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 0.44
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -3

Query: 164 IIYLRYQKLLYGCIIKNKFLSNHHTFEHTKIIDLL*LEALKKYIV 30
           II L    +LY CII    +SN  T    K ID + L A K+ ++
Sbjct: 247 IIPLIILLILY-CIIAKNLMSNAATLVLNKHIDNISLRARKQVVL 290


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -2

Query: 297 HYIIINWNIPMSLLNNLITKSIIILW 220
           HY + N+ + +S L  + T + +++W
Sbjct: 264 HYKLANFTVKISGLFEITTITAMVMW 289


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -2

Query: 297 HYIIINWNIPMSLLNNLITKSIIILW 220
           HY + N+ + +S L  + T + +++W
Sbjct: 220 HYKLANFTVKISGLFEITTITAMVMW 245


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 242 VIKLFNKLIGIFQLIM 289
           ++KLFN+  GI  L+M
Sbjct: 515 LVKLFNETFGIVLLLM 530


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 242 VIKLFNKLIGIFQLIM 289
           ++KLFN+  GI  L+M
Sbjct: 240 LVKLFNETFGIVLLLM 255


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 245 IKLFNKLIGIFQLIM 289
           +KLFN++ G+  L++
Sbjct: 237 VKLFNEVFGVSLLVL 251



 Score = 19.4 bits (38), Expect = 9.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 277 PVNYDVVFSPNKK 315
           P+NY +VFS  K+
Sbjct: 350 PINYTLVFSVLKQ 362


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 245 IKLFNKLIGIFQLIM 289
           +KLFN++ G+  L++
Sbjct: 255 VKLFNEVFGVSLLVL 269


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = +1

Query: 103 ERNLFLIMHP*SSFWYLKYIIE 168
           + +LF++ H     W+ + I E
Sbjct: 50  DEHLFIVTHQAYELWFKQIIYE 71


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = +1

Query: 103 ERNLFLIMHP*SSFWYLKYIIE 168
           + +LF++ H     W+ + I E
Sbjct: 50  DEHLFIVTHQAYELWFKQIIYE 71


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = +1

Query: 103 ERNLFLIMHP*SSFWYLKYIIE 168
           + +LF++ H     W+ + I E
Sbjct: 50  DEHLFIVTHQAYELWFKQIIYE 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,748
Number of Sequences: 336
Number of extensions: 1353
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)