Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6p04
         (319 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457285-1|CAG33566.1|  283|Homo sapiens EIF2B3 protein.               30   1.3  
BC018728-1|AAH18728.1|  401|Homo sapiens EIF2B3 protein protein.       30   1.3  
AL136380-6|CAI23132.1|  412|Homo sapiens eukaryotic translation ...    30   1.3  
AL136380-5|CAI23131.1|  452|Homo sapiens eukaryotic translation ...    30   1.3  
AL136380-3|CAI23129.1|  221|Homo sapiens eukaryotic translation ...    30   1.3  
AK024006-1|BAB14770.1|  452|Homo sapiens NA.  protein.                 30   1.3  
AK022399-1|BAB14027.1|  283|Homo sapiens protein ( Homo sapiens ...    30   1.3  
AF257077-1|AAF91351.1|  452|Homo sapiens eukaryotic translation ...    30   1.3  
L08239-1|AAA74510.1|  434|Homo sapiens MG61 protein.                   29   3.0  
BC019080-1|AAH19080.1|  456|Homo sapiens porcupine homolog (Dros...    29   3.0  
AF317061-1|AAG39631.1|  450|Homo sapiens porcupine isoform A pro...    29   3.0  
AF317060-1|AAG39630.1|  455|Homo sapiens porcupine isoform C pro...    29   3.0  
AF317059-1|AAG39629.1|  456|Homo sapiens porcupine isoform B pro...    29   3.0  
AF317058-1|AAG39628.1|  461|Homo sapiens porcupine isoform D pro...    29   3.0  

>CR457285-1|CAG33566.1|  283|Homo sapiens EIF2B3 protein.
          Length = 283

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 125 IIKNKFLSNHHTFE-HTKIIDLL*LEALKKYIVEFLYES 12
           +IK   L  H     HT ++D   L  LKKYIV+FL E+
Sbjct: 12  VIKGSILQKHPRIRFHTGLVDAH-LYCLKKYIVDFLMEN 49


>BC018728-1|AAH18728.1|  401|Homo sapiens EIF2B3 protein protein.
          Length = 401

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 125 IIKNKFLSNHHTFE-HTKIIDLL*LEALKKYIVEFLYES 12
           +IK   L  H     HT ++D   L  LKKYIV+FL E+
Sbjct: 181 VIKGSILQKHPRIRFHTGLVDAH-LYCLKKYIVDFLMEN 218


>AL136380-6|CAI23132.1|  412|Homo sapiens eukaryotic translation
           initiation factor 2B, subunit 3 gamma, 58kDa protein.
          Length = 412

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 125 IIKNKFLSNHHTFE-HTKIIDLL*LEALKKYIVEFLYES 12
           +IK   L  H     HT ++D   L  LKKYIV+FL E+
Sbjct: 181 VIKGSILQKHPRIRFHTGLVDAH-LYCLKKYIVDFLMEN 218


>AL136380-5|CAI23131.1|  452|Homo sapiens eukaryotic translation
           initiation factor 2B, subunit 3 gamma, 58kDa protein.
          Length = 452

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 125 IIKNKFLSNHHTFE-HTKIIDLL*LEALKKYIVEFLYES 12
           +IK   L  H     HT ++D   L  LKKYIV+FL E+
Sbjct: 181 VIKGSILQKHPRIRFHTGLVDAH-LYCLKKYIVDFLMEN 218


>AL136380-3|CAI23129.1|  221|Homo sapiens eukaryotic translation
           initiation factor 2B, subunit 3 gamma, 58kDa protein.
          Length = 221

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 125 IIKNKFLSNHHTFE-HTKIIDLL*LEALKKYIVEFLYES 12
           +IK   L  H     HT ++D   L  LKKYIV+FL E+
Sbjct: 1   VIKGSILQKHPRIRFHTGLVDAH-LYCLKKYIVDFLMEN 38


>AK024006-1|BAB14770.1|  452|Homo sapiens NA.  protein.
          Length = 452

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 125 IIKNKFLSNHHTFE-HTKIIDLL*LEALKKYIVEFLYES 12
           +IK   L  H     HT ++D   L  LKKYIV+FL E+
Sbjct: 181 VIKGSILQKHPRIRFHTGLVDAH-LYCLKKYIVDFLMEN 218


>AK022399-1|BAB14027.1|  283|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12337 fis, clone MAMMA1002236, highly similar to
           TRANSLATION INITIATION FACTOR EIF-2B GAMMA SUBUNIT. ).
          Length = 283

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 125 IIKNKFLSNHHTFE-HTKIIDLL*LEALKKYIVEFLYES 12
           +IK   L  H     HT ++D   L  LKKYIV+FL E+
Sbjct: 12  VIKGSILQKHPRIRFHTGLVDAH-LYCLKKYIVDFLMEN 49


>AF257077-1|AAF91351.1|  452|Homo sapiens eukaryotic translation
           initiation factor EIF2B subunit 3 protein.
          Length = 452

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 125 IIKNKFLSNHHTFE-HTKIIDLL*LEALKKYIVEFLYES 12
           +IK   L  H     HT ++D   L  LKKYIV+FL E+
Sbjct: 181 VIKGSILQKHPRIRFHTGLVDAH-LYCLKKYIVDFLMEN 218


>L08239-1|AAA74510.1|  434|Homo sapiens MG61 protein.
          Length = 434

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 291 IIINWNIPMSL-LNNLITKSIIILWGLNFVVNIFAALTL 178
           ++ +WN+PMS  LNN + K+ + L   + V+  +AA  L
Sbjct: 274 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASAL 312


>BC019080-1|AAH19080.1|  456|Homo sapiens porcupine homolog
           (Drosophila) protein.
          Length = 456

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 291 IIINWNIPMSL-LNNLITKSIIILWGLNFVVNIFAALTL 178
           ++ +WN+PMS  LNN + K+ + L   + V+  +AA  L
Sbjct: 296 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASAL 334


>AF317061-1|AAG39631.1|  450|Homo sapiens porcupine isoform A
           protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 291 IIINWNIPMSL-LNNLITKSIIILWGLNFVVNIFAALTL 178
           ++ +WN+PMS  LNN + K+ + L   + V+  +AA  L
Sbjct: 290 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASAL 328


>AF317060-1|AAG39630.1|  455|Homo sapiens porcupine isoform C
           protein.
          Length = 455

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 291 IIINWNIPMSL-LNNLITKSIIILWGLNFVVNIFAALTL 178
           ++ +WN+PMS  LNN + K+ + L   + V+  +AA  L
Sbjct: 295 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASAL 333


>AF317059-1|AAG39629.1|  456|Homo sapiens porcupine isoform B
           protein.
          Length = 456

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 291 IIINWNIPMSL-LNNLITKSIIILWGLNFVVNIFAALTL 178
           ++ +WN+PMS  LNN + K+ + L   + V+  +AA  L
Sbjct: 296 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASAL 334


>AF317058-1|AAG39628.1|  461|Homo sapiens porcupine isoform D
           protein.
          Length = 461

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 291 IIINWNIPMSL-LNNLITKSIIILWGLNFVVNIFAALTL 178
           ++ +WN+PMS  LNN + K+ + L   + V+  +AA  L
Sbjct: 301 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASAL 339


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,840,101
Number of Sequences: 237096
Number of extensions: 669896
Number of successful extensions: 695
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)