Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6p04
         (319 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023904-1|ABA81838.1|  563|Drosophila melanogaster IP14421p pro...    29   0.98 
AY113532-1|AAM29537.1|  518|Drosophila melanogaster RE60854p pro...    29   0.98 
AE014296-574|AAN11534.1|  512|Drosophila melanogaster CG15812-PB...    29   0.98 
AE014296-573|AAF47724.2|  518|Drosophila melanogaster CG15812-PA...    29   0.98 
AE014134-1582|AAF52727.1|  678|Drosophila melanogaster CG9525-PA...    27   5.2  
AJ009736-3|CAA08808.1|  510|Drosophila melanogaster envelope pro...    27   6.9  
BT022543-1|AAY54959.1|  268|Drosophila melanogaster IP07869p pro...    26   9.1  
AE014134-1986|AAF53030.1|  251|Drosophila melanogaster CG14070-P...    26   9.1  

>BT023904-1|ABA81838.1|  563|Drosophila melanogaster IP14421p
           protein.
          Length = 563

 Score = 29.5 bits (63), Expect = 0.98
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -2

Query: 162 NIFKIPKTTLWMHNQK 115
           N+F+IPK+TLW H Q+
Sbjct: 525 NLFEIPKSTLWRHLQR 540


>AY113532-1|AAM29537.1|  518|Drosophila melanogaster RE60854p
           protein.
          Length = 518

 Score = 29.5 bits (63), Expect = 0.98
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -2

Query: 162 NIFKIPKTTLWMHNQK 115
           N+F+IPK+TLW H Q+
Sbjct: 480 NLFEIPKSTLWRHLQR 495


>AE014296-574|AAN11534.1|  512|Drosophila melanogaster CG15812-PB,
           isoform B protein.
          Length = 512

 Score = 29.5 bits (63), Expect = 0.98
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -2

Query: 162 NIFKIPKTTLWMHNQK 115
           N+F+IPK+TLW H Q+
Sbjct: 474 NLFEIPKSTLWRHLQR 489


>AE014296-573|AAF47724.2|  518|Drosophila melanogaster CG15812-PA,
           isoform A protein.
          Length = 518

 Score = 29.5 bits (63), Expect = 0.98
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -2

Query: 162 NIFKIPKTTLWMHNQK 115
           N+F+IPK+TLW H Q+
Sbjct: 480 NLFEIPKSTLWRHLQR 495


>AE014134-1582|AAF52727.1|  678|Drosophila melanogaster CG9525-PA
           protein.
          Length = 678

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 128 CIIKNKFLSNHHTFEHTKII 69
           CI K++ L NH T E TK+I
Sbjct: 626 CICKSQILENHSTSEVTKLI 645


>AJ009736-3|CAA08808.1|  510|Drosophila melanogaster envelope
           protein protein.
          Length = 510

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 300 EHYIIINWNIPMSLLNNLITKSIIILWGLNFV 205
           E  I++ WNIP + +N   T + I++ G N +
Sbjct: 361 EPNILLTWNIPETAVNQDCTHNKILISGNNII 392


>BT022543-1|AAY54959.1|  268|Drosophila melanogaster IP07869p
           protein.
          Length = 268

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -2

Query: 267 MSLLNNLITKSIIILWGLNFVVNIFAALTLRGLLY-NIFKIPKTTLWMHNQK*ISFK 100
           +  L ++++  +++   L F   +FA LT+  LLY ++F    + LW  N   +S +
Sbjct: 161 LETLFSIVSFGLLVFIWLGFHCKLFAYLTVIALLYHDVFSNHWSMLWGWNDTLLSIQ 217


>AE014134-1986|AAF53030.1|  251|Drosophila melanogaster CG14070-PA
           protein.
          Length = 251

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -2

Query: 267 MSLLNNLITKSIIILWGLNFVVNIFAALTLRGLLY-NIFKIPKTTLWMHNQK*ISFK 100
           +  L ++++  +++   L F   +FA LT+  LLY ++F    + LW  N   +S +
Sbjct: 144 LETLFSIVSFGLLVFIWLGFHCKLFAYLTVIALLYHDVFSNHWSMLWGWNDTLLSIQ 200


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,487,958
Number of Sequences: 53049
Number of extensions: 182953
Number of successful extensions: 346
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)