Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6p01
         (358 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   6.0  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    22   6.0  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    22   7.9  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    22   7.9  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    22   7.9  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 138  TVHAVPTDPDSVYQVPAVRSLTHGKTSSHIHTFSYLVAEPFK*N 269
            T H  PT+   V+ +  + S THG+       FS L + PF  N
Sbjct: 1450 TTH-FPTETKLVFDISFIPSTTHGRIDIDHIRFSPL-SMPFAAN 1491


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 180 LDRRSPGRLVQRV 142
           L +R PGRL++RV
Sbjct: 798 LQKREPGRLLERV 810


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 142 TVRVPRPLPAEE 107
           T  VPRPLP++E
Sbjct: 431 TPSVPRPLPSQE 442


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 219 RMSSRVSKIEPQALDRRSPG 160
           R  S  S  EP A DR++PG
Sbjct: 283 RHLSTSSADEPDACDRKAPG 302


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 275 YLILFKWFRDQVTECMD 225
           +L L +WF  Q+T   D
Sbjct: 421 FLFLARWFAQQITSSTD 437


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,533
Number of Sequences: 2352
Number of extensions: 8751
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)