Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6p01
(358 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095512-1|AAH95512.1| 466|Homo sapiens adrenergic, alpha-1A-, ... 29 4.2
U03866-1|AAB60353.1| 466|Homo sapiens adrenergic alpha-1c recep... 28 7.4
U02569-1|AAA93114.1| 466|Homo sapiens alpha1C adrenergic recept... 28 7.4
L31774-1|AAB59486.1| 466|Homo sapiens alpha-1C-adrenergic recep... 28 7.4
D32202-1|BAA06901.1| 499|Homo sapiens alpha 1C adrenergic recep... 28 7.4
D32201-1|BAA06900.1| 429|Homo sapiens alpha 1C adrenergic recep... 28 7.4
D25235-1|BAA04960.1| 466|Homo sapiens alpha1C adrenergic recept... 28 7.4
AY491781-1|AAR84650.1| 342|Homo sapiens alpha 1A adrenoceptor i... 28 7.4
AY491780-1|AAR84649.1| 297|Homo sapiens alpha 1A adrenoceptor i... 28 7.4
AY491779-1|AAR84648.1| 297|Homo sapiens alpha 1A adrenoceptor i... 28 7.4
AY491778-1|AAR84647.1| 372|Homo sapiens alpha 1A adrenoceptor i... 28 7.4
AY491777-1|AAR84646.1| 324|Homo sapiens alpha 1A adrenoceptor i... 28 7.4
AY491776-1|AAR84645.1| 370|Homo sapiens alpha 1A adrenoceptor i... 28 7.4
AY491775-1|AAR84644.1| 324|Homo sapiens alpha 1A adrenoceptor i... 28 7.4
AY389505-1|AAQ91331.1| 466|Homo sapiens adrenergic alpha 1A rec... 28 7.4
AF395806-1|AAK77197.1| 466|Homo sapiens adrenergic receptor alp... 28 7.4
AF013261-1|AAC06138.1| 455|Homo sapiens alpha 1A adrenergic rec... 28 7.4
AB065703-1|BAC05926.1| 466|Homo sapiens seven transmembrane hel... 28 7.4
>BC095512-1|AAH95512.1| 466|Homo sapiens adrenergic, alpha-1A-,
receptor protein.
Length = 466
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYALFSALGSFY 194
>U03866-1|AAB60353.1| 466|Homo sapiens adrenergic alpha-1c receptor
protein protein.
Length = 466
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>U02569-1|AAA93114.1| 466|Homo sapiens alpha1C adrenergic receptor
protein.
Length = 466
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>L31774-1|AAB59486.1| 466|Homo sapiens alpha-1C-adrenergic receptor
protein.
Length = 466
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>D32202-1|BAA06901.1| 499|Homo sapiens alpha 1C adrenergic receptor
isoform 2 protein.
Length = 499
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>D32201-1|BAA06900.1| 429|Homo sapiens alpha 1C adrenergic receptor
isoform 3 protein.
Length = 429
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>D25235-1|BAA04960.1| 466|Homo sapiens alpha1C adrenergic receptor
protein.
Length = 466
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>AY491781-1|AAR84650.1| 342|Homo sapiens alpha 1A adrenoceptor
isoform 6 protein.
Length = 342
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>AY491780-1|AAR84649.1| 297|Homo sapiens alpha 1A adrenoceptor
isoform 5b protein.
Length = 297
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>AY491779-1|AAR84648.1| 297|Homo sapiens alpha 1A adrenoceptor
isoform 5a protein.
Length = 297
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>AY491778-1|AAR84647.1| 372|Homo sapiens alpha 1A adrenoceptor
isoform 3c protein.
Length = 372
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>AY491777-1|AAR84646.1| 324|Homo sapiens alpha 1A adrenoceptor
isoform 3b protein.
Length = 324
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>AY491776-1|AAR84645.1| 370|Homo sapiens alpha 1A adrenoceptor
isoform 2c protein.
Length = 370
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>AY491775-1|AAR84644.1| 324|Homo sapiens alpha 1A adrenoceptor
isoform 2b protein.
Length = 324
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>AY389505-1|AAQ91331.1| 466|Homo sapiens adrenergic alpha 1A
receptor protein.
Length = 466
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>AF395806-1|AAK77197.1| 466|Homo sapiens adrenergic receptor
alpha-1a protein.
Length = 466
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>AF013261-1|AAC06138.1| 455|Homo sapiens alpha 1A adrenergic
receptor isoform 4 protein.
Length = 455
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
>AB065703-1|BAC05926.1| 466|Homo sapiens seven transmembrane helix
receptor protein.
Length = 466
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 65 VCAVPMTSLIGPMWFLRWQRPRHPDSTRC--TNRPGLRLSSACGSIF 199
V A+ + IGP++ W++P D T C PG L SA GS +
Sbjct: 150 VWALSLVISIGPLF--GWRQPAPEDETICQINEEPGYVLFSALGSFY 194
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,297,396
Number of Sequences: 237096
Number of extensions: 1191537
Number of successful extensions: 2525
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2525
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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