Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6o17
         (418 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110371-1|AAI10372.1| 1506|Homo sapiens VPRBP protein protein.        29   6.2  
BC036019-1|AAH36019.1|  444|Homo sapiens X-linked Kx blood group...    29   6.2  
BC022792-1|AAH22792.1| 1058|Homo sapiens VPRBP protein protein.        29   6.2  
AY534238-1|AAT07087.1|  444|Homo sapiens XK-related protein 1 pr...    29   6.2  
AF061935-1|AAG27134.1| 1401|Homo sapiens HIV-1 Vpr-binding prote...    29   6.2  
AB018343-1|BAA34520.2| 1521|Homo sapiens KIAA0800 protein protein.     29   6.2  

>BC110371-1|AAI10372.1| 1506|Homo sapiens VPRBP protein protein.
          Length = 1506

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 256 SALSLAT*IQCGPATFLISSSQRVYGLPTRRLPIKPKA 143
           SAL +     CGP   + S  + + G P R+LP  PK+
Sbjct: 679 SALQIIINCVCGPDNRISSIGKFISGTPRRKLPQNPKS 716


>BC036019-1|AAH36019.1|  444|Homo sapiens X-linked Kx blood group
           (McLeod syndrome) protein.
          Length = 444

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -3

Query: 398 TFVVVLFIINLLSLLFHAYTYFFCTFSLYT*YMYGPLSGKGLLQRFPLCFVS 243
           T+VVV+ +IN  SL  + +  F+C+ S +   +   LS  G      LCF++
Sbjct: 235 TWVVVIILINFFSLFLYPWILFWCSGSPFPENIEKALSRVG--TTIVLCFLT 284


>BC022792-1|AAH22792.1| 1058|Homo sapiens VPRBP protein protein.
          Length = 1058

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 256 SALSLAT*IQCGPATFLISSSQRVYGLPTRRLPIKPKA 143
           SAL +     CGP   + S  + + G P R+LP  PK+
Sbjct: 231 SALQIIINCVCGPDNRISSIGKFISGTPRRKLPQNPKS 268


>AY534238-1|AAT07087.1|  444|Homo sapiens XK-related protein 1
           protein.
          Length = 444

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -3

Query: 398 TFVVVLFIINLLSLLFHAYTYFFCTFSLYT*YMYGPLSGKGLLQRFPLCFVS 243
           T+VVV+ +IN  SL  + +  F+C+ S +   +   LS  G      LCF++
Sbjct: 235 TWVVVIILINFFSLFLYPWILFWCSGSPFPENIEKALSRVG--TTIVLCFLT 284


>AF061935-1|AAG27134.1| 1401|Homo sapiens HIV-1 Vpr-binding protein
           protein.
          Length = 1401

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 256 SALSLAT*IQCGPATFLISSSQRVYGLPTRRLPIKPKA 143
           SAL +     CGP   + S  + + G P R+LP  PK+
Sbjct: 574 SALQIIINCVCGPDNRISSIGKFISGTPRRKLPQNPKS 611


>AB018343-1|BAA34520.2| 1521|Homo sapiens KIAA0800 protein protein.
          Length = 1521

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 256 SALSLAT*IQCGPATFLISSSQRVYGLPTRRLPIKPKA 143
           SAL +     CGP   + S  + + G P R+LP  PK+
Sbjct: 694 SALQIIINCVCGPDNRISSIGKFISGTPRRKLPQNPKS 731


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,584,363
Number of Sequences: 237096
Number of extensions: 1268955
Number of successful extensions: 2086
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2086
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)