Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6o14
(352 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 1.0
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 1.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 1.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.4
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 2.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 4.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 4.2
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 20 7.4
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 20 7.4
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 20 9.8
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 23.0 bits (47), Expect = 1.0
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +2
Query: 116 SYTDVDDLFTVDSFN--ILRLRCSN-VRVTYHPDAG 214
+YT + DLF D N I RL S V +T + D G
Sbjct: 112 NYTGISDLFVFDDLNDYINRLNYSAFVNLTAYYDGG 147
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 1.4
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = +3
Query: 9 FTGVITYSMELFPTSVRGLLLGLG-ALTSRIGNMMAPLTPMLMTFS------PSIPSIFF 167
+TG + Y LFP ++ +LL G L + + +TP L S ++ IFF
Sbjct: 230 WTGKVVYFTSLFPYALLTILLIRGLTLPGAMEGLKYYVTPNLSKLSDPEVWIDAVTQIFF 289
Query: 168 GCAAVMSGLLII 203
A + L+ +
Sbjct: 290 SYALGLGALVAL 301
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 1.4
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = +3
Query: 9 FTGVITYSMELFPTSVRGLLLGLG-ALTSRIGNMMAPLTPMLMTFS------PSIPSIFF 167
+TG + Y LFP ++ +LL G L + + +TP L S ++ IFF
Sbjct: 283 WTGKVVYFTSLFPYALLTILLIRGLTLPGAMEGLKYYVTPNLSKLSDPEVWIDAVTQIFF 342
Query: 168 GCAAVMSGLLII 203
A + L+ +
Sbjct: 343 SYALGLGALVAL 354
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 1.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 58 EGYYLVLARSRLGSGI 105
EG+YL A + +GSGI
Sbjct: 781 EGFYLCQASNGIGSGI 796
Score = 21.8 bits (44), Expect = 2.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 99 GNMMAPLTPMLMTFSPSIPSIFFGCAAVMS 188
G + PL M PSIP CAA+ S
Sbjct: 1096 GPLSEPLLTQTMEDVPSIPPEDVRCAALTS 1125
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 1.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 58 EGYYLVLARSRLGSGI 105
EG+YL A + +GSGI
Sbjct: 777 EGFYLCQASNGIGSGI 792
Score = 21.8 bits (44), Expect = 2.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 99 GNMMAPLTPMLMTFSPSIPSIFFGCAAVMS 188
G + PL M PSIP CAA+ S
Sbjct: 1092 GPLSEPLLTQTMEDVPSIPPEDVRCAALTS 1121
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 2.4
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 191 VTYHPDAGDKRPTAVGY 241
V HP GD P AV Y
Sbjct: 100 VVSHPLTGDLSPAAVSY 116
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 4.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 58 EGYYLVLARSRLGSGI 105
EGYYL A + +G+G+
Sbjct: 750 EGYYLCEAVNGIGAGL 765
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.0 bits (42), Expect = 4.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 94 LDVSAPRPSNNPRTLVG 44
L++S PS +PR LVG
Sbjct: 875 LNLSKKSPSPSPRPLVG 891
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 20.2 bits (40), Expect = 7.4
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +3
Query: 24 TYSMELFPTSVRGLLLGLG 80
TY + L+P+SV+ + LG+G
Sbjct: 218 TY-VALYPSSVQVIALGVG 235
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.2 bits (40), Expect = 7.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 259 SST*RTVSNSGWSLVSGVRMISNPDITAAQPKNIEGIDGEK 137
SST ++V S L + V + P++ A + + + G+ GE+
Sbjct: 28 SSTGQSVEFSPMELNALVGTPAAPNMPAEEGEGMAGVTGEE 68
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 19.8 bits (39), Expect = 9.8
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +3
Query: 114 PLTPMLMTFSPSIPSIFFGCAAVMSGL 194
P+T L P + + C V SGL
Sbjct: 517 PVTVNLTKLHPPADLVVYACNVVGSGL 543
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,828
Number of Sequences: 438
Number of extensions: 1872
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8060325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -