Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6o12
         (158 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   1.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    19   4.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    18   7.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    18   7.8  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 97  IKLTTYNSETVPHYGYSAVF 38
           IKL  Y+ + + H+G + V+
Sbjct: 130 IKLVDYHHQLLGHFGATKVY 149


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 100 EIKLTTYNSETVPH 59
           E K TTY   T PH
Sbjct: 343 EDKYTTYFLNTYPH 356


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 18.2 bits (35), Expect = 7.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 143 TKIYLIY*TS 114
           TK+YL+Y +S
Sbjct: 122 TKVYLVYCSS 131


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 18.2 bits (35), Expect = 7.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 143 TKIYLIY*TS 114
           TK+YL+Y +S
Sbjct: 118 TKVYLVYCSS 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,866
Number of Sequences: 336
Number of extensions: 378
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 33
effective length of database: 111,497
effective search space used:  2118443
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)