Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6o10
(440 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3... 64 3e-10
X53281-1|CAA37376.1| 162|Homo sapiens general transcription fac... 64 3e-10
X53280-1|CAA37375.1| 206|Homo sapiens general transcription fac... 64 3e-10
BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription fac... 64 3e-10
BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription fac... 64 3e-10
AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BT... 64 3e-10
BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription fac... 62 1e-09
BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein. 62 1e-09
AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription fac... 62 1e-09
AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription fac... 62 1e-09
AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens ... 62 1e-09
M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein. 52 1e-06
M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein. 40 0.005
M90357-1|AAA58398.1| 158|Homo sapiens basic transcription facto... 36 0.062
M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein. 35 0.11
BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein. 32 0.77
AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled recep... 31 1.8
>X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3
protein.
Length = 162
Score = 63.7 bits (148), Expect = 3e-10
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +2
Query: 143 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDD 265
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADD 41
>X53281-1|CAA37376.1| 162|Homo sapiens general transcription factor
protein.
Length = 162
Score = 63.7 bits (148), Expect = 3e-10
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +2
Query: 143 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDD 265
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADD 41
>X53280-1|CAA37375.1| 206|Homo sapiens general transcription factor
protein.
Length = 206
Score = 63.7 bits (148), Expect = 3e-10
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +2
Query: 143 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDD 265
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADD 85
>BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 63.7 bits (148), Expect = 3e-10
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +2
Query: 143 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDD 265
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADD 41
>BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 63.7 bits (148), Expect = 3e-10
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +2
Query: 143 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDD 265
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADD 41
>AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BTF 3
protein.
Length = 162
Score = 63.7 bits (148), Expect = 3e-10
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +2
Query: 143 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDD 265
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADD 41
>BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 61.7 bits (143), Expect = 1e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 158 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDD 265
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADD 36
>BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein.
Length = 158
Score = 61.7 bits (143), Expect = 1e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 158 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDD 265
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADD 36
>AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 61.7 bits (143), Expect = 1e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 158 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDD 265
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADD 36
>AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 61.7 bits (143), Expect = 1e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 158 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDD 265
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADD 36
>AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ14844 fis, clone PLACE1000133, highly similar to
TRANSCRIPTION FACTOR BTF3. ).
Length = 158
Score = 61.7 bits (143), Expect = 1e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 158 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDD 265
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADD 36
>M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein.
Length = 214
Score = 51.6 bits (118), Expect = 1e-06
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +2
Query: 140 TLKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDD 265
T +++ KL KLQ+QVRIGGKGT RKKKV H TA DD
Sbjct: 30 TCRSTDHEPGKLAKLQAQVRIGGKGTAHRKKKVFHRTATADD 71
>M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein.
Length = 67
Score = 39.5 bits (88), Expect = 0.005
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +2
Query: 143 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDD 265
+K + MN EKL KLQ++V IGG +KKVVH TA +D
Sbjct: 1 MKETIMNQEKLAKLQAKVPIGGTA---HRKKVVHRTATAND 38
>M90357-1|AAA58398.1| 158|Homo sapiens basic transcription factor
3a protein.
Length = 158
Score = 35.9 bits (79), Expect = 0.062
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 143 LKNSRMNSEKLKKLQSQVRIGGK 211
+K + MN EKL KLQ+QVRIGGK
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGK 67
>M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein.
Length = 111
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +2
Query: 143 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTA 253
+K + MN +KL K Q++V G KGT R KKVVH TA
Sbjct: 1 MKETIMN-QKLTKRQAEVHTGRKGTAHR-KKVVHTTA 35
>BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein.
Length = 153
Score = 32.3 bits (70), Expect = 0.77
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2
Query: 209 KGTPRRKKKVVHVTAATDD 265
+GT RRKKKVVH TA DD
Sbjct: 13 QGTARRKKKVVHRTATADD 31
>AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled receptor
protein.
Length = 915
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 305 IFLFIYLFIYVQTEKKK*YRVIGNCSINKK 394
I+LFIYLFIY+ +K +R G+ S+ +K
Sbjct: 17 IYLFIYLFIYLFKQKNGGHRTKGDVSVVEK 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,848,348
Number of Sequences: 237096
Number of extensions: 1036663
Number of successful extensions: 1572
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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