Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6o08
(638 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear ... 115 1e-25
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 115 1e-25
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 106 8e-23
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 94 3e-19
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 94 3e-19
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 94 3e-19
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 94 3e-19
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 94 3e-19
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 94 3e-19
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 93 6e-19
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 93 1e-18
AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear r... 83 8e-16
BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protei... 60 7e-09
BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protei... 60 7e-09
AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens ... 60 7e-09
AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein. 60 7e-09
AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG... 57 5e-08
BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein. 56 8e-08
AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protei... 56 8e-08
AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens ... 56 8e-08
AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein. 56 8e-08
AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein. 54 4e-07
Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein. 53 7e-07
X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein. 53 7e-07
U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein. 53 7e-07
BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protei... 53 7e-07
AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein. 53 7e-07
X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein. 51 4e-06
BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein. 51 4e-06
BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protei... 51 4e-06
BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protei... 51 4e-06
AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protei... 51 4e-06
AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protei... 51 4e-06
BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein. 44 5e-04
AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG... 44 5e-04
AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG... 44 5e-04
AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protei... 44 5e-04
BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein. 40 0.006
AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain co... 40 0.006
AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain co... 40 0.006
AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH domain-con... 40 0.006
AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding pr... 40 0.006
U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3 pr... 40 0.010
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 40 0.010
BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein. 40 0.010
AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element (F... 40 0.010
AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element (F... 40 0.010
AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element (F... 40 0.010
AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element (F... 40 0.010
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 40 0.010
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 40 0.010
U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein prot... 39 0.017
BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein. 39 0.017
BC067878-1|AAH67878.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 38 0.030
BC051703-1|AAH51703.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 38 0.030
AY039237-1|AAK72102.1| 630|Homo sapiens DEAD-box protein CAGE p... 38 0.030
AB209366-1|BAD92603.1| 493|Homo sapiens far upstream element-bi... 38 0.030
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 38 0.040
U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2 pr... 38 0.040
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 38 0.040
U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like RNA-... 36 0.092
AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nov... 36 0.092
BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventr... 36 0.12
BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventr... 36 0.12
AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing regula... 36 0.12
AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nov... 36 0.16
U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antige... 34 0.37
BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 33 0.86
AK001746-1|BAA91878.1| 440|Homo sapiens protein ( Homo sapiens ... 33 0.86
AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein. 33 0.86
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 33 1.1
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 33 1.1
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 33 1.1
AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884... 33 1.1
AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens ... 33 1.1
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 33 1.1
BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase... 32 1.5
AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated tran... 32 1.5
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 31 2.6
>AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 379
Score = 115 bits (277), Expect = 1e-25
Identities = 65/146 (44%), Positives = 91/146 (62%), Gaps = 2/146 (1%)
Frame = +2
Query: 203 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 376
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 377 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKI 556
LSI+A D ET+ EI+K I+P L E+ + GS D + ++R+LIHQS AG +IG G+KI
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCELRLLIHQSLAGGIIGVKGAKI 143
Query: 557 KELREKTGARLKIFSNSAPQSSERIV 634
KELRE T +K+F P S++R+V
Sbjct: 144 KELRENTQTTIKLFQECCPHSTDRVV 169
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 115 bits (277), Expect = 1e-25
Identities = 65/146 (44%), Positives = 91/146 (62%), Gaps = 2/146 (1%)
Frame = +2
Query: 203 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 376
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 30 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 89
Query: 377 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKI 556
LSI+A D ET+ EI+K I+P L E+ + GS D + ++R+LIHQS AG +IG G+KI
Sbjct: 90 LSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCELRLLIHQSLAGGIIGVKGAKI 145
Query: 557 KELREKTGARLKIFSNSAPQSSERIV 634
KELRE T +K+F P S++R+V
Sbjct: 146 KELRENTQTTIKLFQECCPHSTDRVV 171
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 106 bits (254), Expect = 8e-23
Identities = 54/106 (50%), Positives = 75/106 (70%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 496
LR+ Y AS++VPD GPER+LSI+A D ET+ EI+K I+P L E+ + GS D + ++
Sbjct: 57 LRTDYNASVSVPDSSGPERILSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCEL 112
Query: 497 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V
Sbjct: 113 RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 158
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 94.3 bits (224), Expect = 3e-19
Identities = 64/167 (38%), Positives = 89/167 (53%), Gaps = 23/167 (13%)
Frame = +2
Query: 203 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 376
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 377 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 493
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 494 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 94.3 bits (224), Expect = 3e-19
Identities = 64/167 (38%), Positives = 89/167 (53%), Gaps = 23/167 (13%)
Frame = +2
Query: 203 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 376
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 377 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 493
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 494 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 94.3 bits (224), Expect = 3e-19
Identities = 64/167 (38%), Positives = 89/167 (53%), Gaps = 23/167 (13%)
Frame = +2
Query: 203 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 376
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 377 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 493
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 494 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 94.3 bits (224), Expect = 3e-19
Identities = 64/167 (38%), Positives = 89/167 (53%), Gaps = 23/167 (13%)
Frame = +2
Query: 203 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 376
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 377 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 493
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 494 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 94.3 bits (224), Expect = 3e-19
Identities = 64/167 (38%), Positives = 89/167 (53%), Gaps = 23/167 (13%)
Frame = +2
Query: 203 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 376
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 377 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 493
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 494 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 94.3 bits (224), Expect = 3e-19
Identities = 64/167 (38%), Positives = 89/167 (53%), Gaps = 23/167 (13%)
Frame = +2
Query: 203 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 376
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 377 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 493
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 494 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 93.5 bits (222), Expect = 6e-19
Identities = 63/161 (39%), Positives = 86/161 (53%), Gaps = 23/161 (14%)
Frame = +2
Query: 221 KRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERVLSITAE 394
KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+LSI+A
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISA- 92
Query: 395 DDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELDVRMLIH 511
D ET+ EI+K I+P L E N + D + ++R+LIH
Sbjct: 93 DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIH 152
Query: 512 QSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
QS AG +IG G+KIKELRE T +K+F P S++R+V
Sbjct: 153 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 92.7 bits (220), Expect = 1e-18
Identities = 63/167 (37%), Positives = 88/167 (52%), Gaps = 23/167 (13%)
Frame = +2
Query: 203 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 376
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 377 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 493
LSI+ D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSIST-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 494 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
>AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 306
Score = 83.0 bits (196), Expect = 8e-16
Identities = 52/124 (41%), Positives = 71/124 (57%), Gaps = 21/124 (16%)
Frame = +2
Query: 326 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCL--------------------- 442
QY AS++VPD GPER+LSI+A D ET+ EI+K I+P L
Sbjct: 2 QYNASVSVPDSSGPERILSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDA 60
Query: 443 AEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS 622
E N + D + ++R+LIHQS AG +IG G+KIKELRE T +K+F P S+
Sbjct: 61 VECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHST 120
Query: 623 ERIV 634
+R+V
Sbjct: 121 DRVV 124
>BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 60.1 bits (139), Expect = 7e-09
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 481
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 482 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAV 150
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +RML+H G +IGK G +K +RE++ AR+ I S P+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE 60
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 476 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHV 289
>BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 60.1 bits (139), Expect = 7e-09
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 481
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 482 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAV 150
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +RML+H G +IGK G +K +RE++ AR+ I S P+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE 60
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 476 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHV 289
>AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens
cDNA FLJ13931 fis, clone Y79AA1000752, moderately
similar to PUTATIVE HETEROGENEOUS NUCLEAR
RIBONUCLEOPROTEIN X. ).
Length = 403
Score = 60.1 bits (139), Expect = 7e-09
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 481
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 482 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAV 150
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +RML+H G +IGK G +K +RE++ AR+ I S P+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE 60
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 476 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHV 289
>AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein.
Length = 403
Score = 60.1 bits (139), Expect = 7e-09
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 481
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 482 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAV 150
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +RML+H G +IGK G +K +RE++ AR+ I S P+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE 60
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 476 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHV 289
>AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG10
protein.
Length = 369
Score = 57.2 bits (132), Expect = 5e-08
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Frame = +2
Query: 326 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 490
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 491 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAV 116
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 476 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V
Sbjct: 204 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHV 255
>BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein.
Length = 313
Score = 56.4 bits (130), Expect = 8e-08
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 490
+R + A I + + PER+++IT D + N + + +
Sbjct: 39 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Query: 491 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+R+++ S+ G +IGK GSKIKE+RE TGA++++ + P S+ER V
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAV 146
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERIV
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP---ERIV 59
Score = 41.5 bits (93), Expect = 0.002
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +2
Query: 524 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSER 628
GC+IG+ G+KI E+R+ +GA++KI +N+ SSER
Sbjct: 248 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSER 281
>AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protein 3
protein.
Length = 361
Score = 56.4 bits (130), Expect = 8e-08
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 490
+R + A I + + PER+++IT D + N + + +
Sbjct: 39 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Query: 491 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+R+++ S+ G +IGK GSKIKE+RE TGA++++ + P S+ER V
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAV 146
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERIV
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP---ERIV 59
Score = 41.5 bits (93), Expect = 0.002
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +2
Query: 524 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSER 628
GC+IG+ G+KI E+R+ +GA++KI +N+ SSER
Sbjct: 296 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSER 329
>AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
POLY(RC) BINDING PROTEIN 2. ).
Length = 351
Score = 56.4 bits (130), Expect = 8e-08
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 490
+R + A I + + PER+++IT D + N + + +
Sbjct: 71 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Query: 491 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+R+++ S+ G +IGK GSKIKE+RE TGA++++ + P S+ER V
Sbjct: 131 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAV 178
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERIV
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP---ERIV 91
Score = 41.5 bits (93), Expect = 0.002
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +2
Query: 524 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSER 628
GC+IG+ G+KI E+R+ +GA++KI +N+ SSER
Sbjct: 286 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSER 319
>AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein.
Length = 339
Score = 56.4 bits (130), Expect = 8e-08
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 490
+R + A I + + PER+++IT D + N + + +
Sbjct: 39 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Query: 491 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+R+++ S+ G +IGK GSKIKE+RE TGA++++ + P S+ER V
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAV 146
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERIV
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP---ERIV 59
Score = 41.5 bits (93), Expect = 0.002
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +2
Query: 524 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSER 628
GC+IG+ G+KI E+R+ +GA++KI +N+ SSER
Sbjct: 274 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSER 307
>AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein.
Length = 397
Score = 54.0 bits (124), Expect = 4e-07
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 481
+R Q A IT+ + ER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSFLERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 482 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R++I S+ G +IG+AG+KIKE+RE TGA++++ + P S+ER V
Sbjct: 100 PPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQVQVAGDLFPNSTERAV 150
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 476 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHV 289
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS 607
L +RML+H G +IGK G +K +RE++ AR+ I S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS 57
>Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein.
Length = 299
Score = 53.2 bits (122), Expect = 7e-07
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 487
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P S+ER +
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI 146
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +R+L+H G +IGK G +K +RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPE 56
>X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein.
Length = 356
Score = 53.2 bits (122), Expect = 7e-07
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 487
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P S+ER +
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI 146
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +R+L+H G +IGK G +K +RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPE 56
Score = 36.7 bits (81), Expect = 0.069
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 500 MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ I + GC+IG+ G+ I E+R+ +GA++KI +N SS R V
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQV 327
>U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein.
Length = 356
Score = 53.2 bits (122), Expect = 7e-07
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 487
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P S+ER +
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI 146
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +R+L+H G +IGK G +K +RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPE 56
Score = 36.7 bits (81), Expect = 0.069
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 500 MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ I + GC+IG+ G+ I E+R+ +GA++KI +N SS R V
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQV 327
>BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protein 1
protein.
Length = 356
Score = 53.2 bits (122), Expect = 7e-07
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 487
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P S+ER +
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI 146
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +R+L+H G +IGK G +K +RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPE 56
Score = 36.7 bits (81), Expect = 0.069
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 500 MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ I + GC+IG+ G+ I E+R+ +GA++KI +N SS R V
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQV 327
>AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 53.2 bits (122), Expect = 7e-07
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 487
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P S+ER +
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI 146
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +R+L+H G +IGK G +K +RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPE 56
Score = 36.7 bits (81), Expect = 0.069
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 500 MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ I + GC+IG+ G+ I E+R+ +GA++KI +N SS R V
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQV 327
>X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein.
Length = 365
Score = 50.8 bits (116), Expect = 4e-06
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 487
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER +
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI 146
Score = 46.0 bits (104), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPE 56
Score = 38.7 bits (86), Expect = 0.017
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +2
Query: 524 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
GC+IG+ G+KI E+R+ +GA++KI +N S++R V
Sbjct: 300 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQV 335
>BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein.
Length = 335
Score = 50.8 bits (116), Expect = 4e-06
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 487
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER +
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI 146
Score = 46.0 bits (104), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPE 56
Score = 38.7 bits (86), Expect = 0.017
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +2
Query: 524 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
GC+IG+ G+KI E+R+ +GA++KI +N S++R V
Sbjct: 270 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQV 305
>BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protein 2
protein.
Length = 366
Score = 50.8 bits (116), Expect = 4e-06
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 487
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER +
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI 146
Score = 46.0 bits (104), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPE 56
Score = 38.7 bits (86), Expect = 0.017
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +2
Query: 524 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
GC+IG+ G+KI E+R+ +GA++KI +N S++R V
Sbjct: 301 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQV 336
>BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protein 2
protein.
Length = 362
Score = 50.8 bits (116), Expect = 4e-06
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 487
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER +
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI 146
Score = 46.0 bits (104), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPE 56
Score = 38.7 bits (86), Expect = 0.017
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +2
Query: 524 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
GC+IG+ G+KI E+R+ +GA++KI +N S++R V
Sbjct: 297 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQV 332
>AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protein 2
isoform b variant protein.
Length = 373
Score = 50.8 bits (116), Expect = 4e-06
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 487
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 51 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 109
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER +
Sbjct: 110 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI 158
Score = 46.0 bits (104), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPE 68
Score = 38.7 bits (86), Expect = 0.017
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +2
Query: 524 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
GC+IG+ G+KI E+R+ +GA++KI +N S++R V
Sbjct: 308 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQV 343
>AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protein 2
protein.
Length = 331
Score = 50.8 bits (116), Expect = 4e-06
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 487
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER +
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI 146
Score = 46.0 bits (104), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPE 56
Score = 38.7 bits (86), Expect = 0.017
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +2
Query: 524 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
GC+IG+ G+KI E+R+ +GA++KI +N S++R V
Sbjct: 266 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQV 301
>BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein.
Length = 360
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 488 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 616
L +RML+H G +IGK G +K +RE++ AR+ I S P+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE 60
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 476 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V
Sbjct: 195 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHV 246
Score = 43.6 bits (98), Expect = 6e-04
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 481
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 482 QELDVRMLIHQSRAGCVIGKAGSKIKELRE 571
+ +R++I S+ G +IGKAG+KIKE+RE
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
>AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 476 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V
Sbjct: 259 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHV 310
Score = 41.9 bits (94), Expect = 0.002
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +2
Query: 326 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 490
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 491 DVRMLIHQSRAGCVIGKAGSKIKELREKTG 580
+R++I S+ G +IGKAG+KIKE+RE G
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIREVRG 98
>AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 476 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V
Sbjct: 259 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHV 310
Score = 41.9 bits (94), Expect = 0.002
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +2
Query: 326 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 490
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 491 DVRMLIHQSRAGCVIGKAGSKIKELREKTG 580
+R++I S+ G +IGKAG+KIKE+RE G
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIREVRG 98
>AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protein
LIP4 protein.
Length = 276
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 476 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V
Sbjct: 81 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHV 132
>BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein.
Length = 653
Score = 40.3 bits (90), Expect = 0.006
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Frame = +2
Query: 185 KRDAYGDDGPAQKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITV-PDCP 361
+ D++G P + +++ + +P + ++ + I + PD
Sbjct: 81 QNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSG 140
Query: 362 G-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSR 520
G PER +T + L +I++ P FH+ G QE+ +I S+
Sbjct: 141 GLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MIPASK 195
Query: 521 AGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS 622
AG VIGK G IK+L+E+ G ++ + PQ++
Sbjct: 196 AGLVIGKGGETIKQLQERAGVKM-VMIQDGPQNT 228
Score = 34.3 bits (75), Expect = 0.37
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 491 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS 619
+ ++ + G +IGK G IK + +++GAR+++ N P +
Sbjct: 377 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNA 419
>AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain
containing protein.
Length = 516
Score = 40.3 bits (90), Expect = 0.006
Identities = 14/41 (34%), Positives = 29/41 (70%)
Frame = +2
Query: 473 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 595
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ +
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain
containing protein.
Length = 561
Score = 40.3 bits (90), Expect = 0.006
Identities = 14/41 (34%), Positives = 29/41 (70%)
Frame = +2
Query: 473 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 595
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ +
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH
domain-containing protein protein.
Length = 561
Score = 40.3 bits (90), Expect = 0.006
Identities = 14/41 (34%), Positives = 29/41 (70%)
Frame = +2
Query: 473 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 595
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ +
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding
protein protein.
Length = 606
Score = 40.3 bits (90), Expect = 0.006
Identities = 14/41 (34%), Positives = 29/41 (70%)
Frame = +2
Query: 473 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 595
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ +
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3
protein.
Length = 600
Score = 39.5 bits (88), Expect = 0.010
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +2
Query: 227 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 394
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 101 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 160
Query: 395 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 565
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 161 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 216
Query: 566 REKTGARL 589
+E+TG ++
Sbjct: 217 QERTGVKM 224
>BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth factor
2 mRNA binding protein 2 protein.
Length = 598
Score = 39.5 bits (88), Expect = 0.010
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +2
Query: 479 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+QE+ V + I G +IGK G+ IK+L GA +KI P SER+V
Sbjct: 425 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMV 475
Score = 34.3 bits (75), Expect = 0.37
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 482 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS 601
+E+ +++L H G +IGK G +K++ +TG ++ I S
Sbjct: 272 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS 311
>BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein.
Length = 261
Score = 39.5 bits (88), Expect = 0.010
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +2
Query: 227 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 394
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 13 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 72
Query: 395 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 565
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 73 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 128
Query: 566 REKTGARL 589
+E+TG ++
Sbjct: 129 QERTGVKM 136
>AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 39.5 bits (88), Expect = 0.010
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +2
Query: 227 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 394
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 13 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 72
Query: 395 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 565
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 73 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 128
Query: 566 REKTGARL 589
+E+TG ++
Sbjct: 129 QERTGVKM 136
>AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 39.5 bits (88), Expect = 0.010
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +2
Query: 227 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 394
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 73 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 132
Query: 395 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 565
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 188
Query: 566 REKTGARL 589
+E+TG ++
Sbjct: 189 QERTGVKM 196
>AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 39.5 bits (88), Expect = 0.010
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +2
Query: 227 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 394
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 13 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 72
Query: 395 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 565
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 73 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 128
Query: 566 REKTGARL 589
+E+TG ++
Sbjct: 129 QERTGVKM 136
>AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 39.5 bits (88), Expect = 0.010
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +2
Query: 227 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 394
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 73 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 132
Query: 395 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 565
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 188
Query: 566 REKTGARL 589
+E+TG ++
Sbjct: 189 QERTGVKM 196
>AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding
protein 2 protein.
Length = 598
Score = 39.5 bits (88), Expect = 0.010
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +2
Query: 479 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+QE+ V + I G +IGK G+ IK+L GA +KI P SER+V
Sbjct: 425 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMV 475
Score = 34.3 bits (75), Expect = 0.37
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 482 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS 601
+E+ +++L H G +IGK G +K++ +TG ++ I S
Sbjct: 272 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS 311
>AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinoma
autoantigen protein.
Length = 556
Score = 39.5 bits (88), Expect = 0.010
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +2
Query: 479 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIV 634
+QE+ V + I G +IGK G+ IK+L GA +KI P SER+V
Sbjct: 383 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMV 433
Score = 34.3 bits (75), Expect = 0.37
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 482 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS 601
+E+ +++L H G +IGK G +K++ +TG ++ I S
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS 312
>U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein
protein.
Length = 644
Score = 38.7 bits (86), Expect = 0.017
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Frame = +2
Query: 350 PDCPG-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLI 508
PD G PER +T + L +I++ P FH+ G QE+ +I
Sbjct: 138 PDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MI 192
Query: 509 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS 622
S+AG VIGK G IK+L+E+ G ++ + PQ++
Sbjct: 193 PASKAGLVIGKGGETIKQLQERAGVKM-VMIQDGPQNT 229
Score = 34.3 bits (75), Expect = 0.37
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 491 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS 619
+ ++ + G +IGK G IK + +++GAR+++ N P +
Sbjct: 378 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNA 420
>BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein.
Length = 304
Score = 38.7 bits (86), Expect = 0.017
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Frame = +2
Query: 350 PDCPG-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLI 508
PD G PER +T + L +I++ P FH+ G QE+ +I
Sbjct: 138 PDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MI 192
Query: 509 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS 622
S+AG VIGK G IK+L+E+ G ++ + PQ++
Sbjct: 193 PASKAGLVIGKGGETIKQLQERAGVKM-VMIQDGPQNT 229
>BC067878-1|AAH67878.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 53 protein.
Length = 631
Score = 37.9 bits (84), Expect = 0.030
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +2
Query: 449 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSER 628
F +QG G +E + I + G VIG +GSKIK+L+ T +++I N ++ R
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKIQII-NGESEAKVR 94
Query: 629 I 631
I
Sbjct: 95 I 95
>BC051703-1|AAH51703.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 53 protein.
Length = 631
Score = 37.9 bits (84), Expect = 0.030
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +2
Query: 449 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSER 628
F +QG G +E + I + G VIG +GSKIK+L+ T +++I N ++ R
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKIQII-NGESEAKVR 94
Query: 629 I 631
I
Sbjct: 95 I 95
>AY039237-1|AAK72102.1| 630|Homo sapiens DEAD-box protein CAGE
protein.
Length = 630
Score = 37.9 bits (84), Expect = 0.030
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +2
Query: 449 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSER 628
F +QG G +E + I + G VIG +GSKIK+L+ T +++I N ++ R
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKIQII-NGESEAKVR 94
Query: 629 I 631
I
Sbjct: 95 I 95
>AB209366-1|BAD92603.1| 493|Homo sapiens far upstream
element-binding protein variant protein.
Length = 493
Score = 37.9 bits (84), Expect = 0.030
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 449 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS 622
FH+ G QE+ +I S+AG VIGK G IK+L+E+ G ++ + PQ++
Sbjct: 27 FHHGDGPGNAVQEI----MIPASKAGLVIGKGGETIKQLQERAGVKM-VMIQDGPQNT 79
Score = 34.3 bits (75), Expect = 0.37
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 491 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS 619
+ ++ + G +IGK G IK + +++GAR+++ N P +
Sbjct: 228 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNA 270
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 37.5 bits (83), Expect = 0.040
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Frame = +2
Query: 350 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 502
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 182 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 238
Query: 503 LIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS 622
+I +AG VIGK G IK+L+E+ G ++ + + + ++
Sbjct: 239 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 278
Score = 29.9 bits (64), Expect = 8.0
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 431 MPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 610
MP +G G ++ I + G VIG+ G +K + ++TGA ++I
Sbjct: 406 MPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLP 465
Query: 611 P 613
P
Sbjct: 466 P 466
>U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2
protein.
Length = 652
Score = 37.5 bits (83), Expect = 0.040
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Frame = +2
Query: 350 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 502
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 126 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 182
Query: 503 LIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS 622
+I +AG VIGK G IK+L+E+ G ++ + + + ++
Sbjct: 183 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 222
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 37.5 bits (83), Expect = 0.040
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Frame = +2
Query: 350 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 502
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 182 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 238
Query: 503 LIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS 622
+I +AG VIGK G IK+L+E+ G ++ + + + ++
Sbjct: 239 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 278
Score = 29.9 bits (64), Expect = 8.0
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 431 MPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 610
MP +G G ++ I + G VIG+ G +K + ++TGA ++I
Sbjct: 406 MPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLP 465
Query: 611 P 613
P
Sbjct: 466 P 466
>U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like
RNA-binding protein protein.
Length = 498
Score = 36.3 bits (80), Expect = 0.092
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +2
Query: 467 SRMGDQ-ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERI 631
S G++ E +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+
Sbjct: 31 SNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 88
Score = 31.5 bits (68), Expect = 2.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 494 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 595
V + + ++ G ++GK G + E +E TGAR++I
Sbjct: 415 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 448
>AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nova-2
protein.
Length = 492
Score = 36.3 bits (80), Expect = 0.092
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +2
Query: 467 SRMGDQ-ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERI 631
S G++ E +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+
Sbjct: 25 SNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 82
Score = 31.5 bits (68), Expect = 2.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 494 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 595
V + + ++ G ++GK G + E +E TGAR++I
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 442
>BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +2
Query: 479 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERI 631
D + +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 99
Score = 31.5 bits (68), Expect = 2.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 494 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 595
V + + ++ G ++GK G + E +E TGAR++I
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 457
>BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +2
Query: 479 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERI 631
D + +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 99
Score = 31.5 bits (68), Expect = 2.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 494 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 595
V + + ++ G ++GK G + E +E TGAR++I
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 457
>AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing
regulatory protein (FUSE binding protein 2) variant
protein.
Length = 384
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 446 EFH-NQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS 622
+FH N G + G + ++I +AG VIGK G IK+L+E+ G ++ + + + ++
Sbjct: 40 QFHDNANGGQNGTVQ---EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 96
Score = 29.9 bits (64), Expect = 8.0
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 431 MPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 610
MP +G G ++ I + G VIG+ G +K + ++TGA ++I
Sbjct: 224 MPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLP 283
Query: 611 P 613
P
Sbjct: 284 P 284
>AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nova-2
[AA 29-492] protein.
Length = 464
Score = 35.5 bits (78), Expect = 0.16
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +2
Query: 485 ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERI 631
E +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 54
Score = 31.5 bits (68), Expect = 2.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 494 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 595
V + + ++ G ++GK G + E +E TGAR++I
Sbjct: 381 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 414
>U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antigen-1
protein.
Length = 510
Score = 34.3 bits (75), Expect = 0.37
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 479 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 595
D + +++LI AG +IGK G I +L+++TGA +K+
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 85
Score = 31.5 bits (68), Expect = 2.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 494 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 595
V + + ++ G ++GK G + E +E TGAR++I
Sbjct: 427 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 460
>BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 43 protein.
Length = 648
Score = 33.1 bits (72), Expect = 0.86
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 476 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERI 631
G +EL + + G VIG+ GSKIK ++ T ++I P+S +I
Sbjct: 64 GHEELPLCFALKSHFVGAVIGRGGSKIKNIQSTTNTTIQIIQEQ-PESLVKI 114
>AK001746-1|BAA91878.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ10884 fis, clone NT2RP4001950. ).
Length = 440
Score = 33.1 bits (72), Expect = 0.86
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +2
Query: 389 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 568
A ++ E++KD++P E NQGG + G QE + LI I G L+
Sbjct: 189 ASQKSSMKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 247
Query: 569 EKTGARLKIFSNSAPQSSE 625
E A+ + N Q E
Sbjct: 248 EVKVAKPEEMKNLETQEEE 266
>AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein.
Length = 648
Score = 33.1 bits (72), Expect = 0.86
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 476 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERI 631
G +EL + + G VIG+ GSKIK ++ T ++I P+S +I
Sbjct: 64 GHEELPLCFALKSHFVGAVIGRGGSKIKNIQSTTNTTIQIIQEQ-PESLVKI 114
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 32.7 bits (71), Expect = 1.1
Identities = 30/101 (29%), Positives = 49/101 (48%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 496
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 461 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 510
Query: 497 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS 619
++I Q +IG+ G +I+E+R+K + F + A +S
Sbjct: 511 DLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKS 551
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 32.7 bits (71), Expect = 1.1
Identities = 30/101 (29%), Positives = 49/101 (48%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 496
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 91 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 140
Query: 497 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS 619
++I Q +IG+ G +I+E+R+K + F + A +S
Sbjct: 141 DLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKS 181
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 32.7 bits (71), Expect = 1.1
Identities = 30/101 (29%), Positives = 49/101 (48%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 496
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 461 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 510
Query: 497 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS 619
++I Q +IG+ G +I+E+R+K + F + A +S
Sbjct: 511 DLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKS 551
>AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884)
protein.
Length = 865
Score = 32.7 bits (71), Expect = 1.1
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +2
Query: 389 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 568
A ++ E++KD++P E NQGG + G QE + LI I G L+
Sbjct: 303 ASQKSSVKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 569 EKTGARLKIFSNSAPQSSE 625
E A+ + N Q E
Sbjct: 362 EVKVAKPEEMKNLETQEEE 380
>AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens
cDNA FLJ11111 fis, clone PLACE1005923. ).
Length = 865
Score = 32.7 bits (71), Expect = 1.1
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +2
Query: 389 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 568
A ++ E++KD++P E NQGG + G QE + LI I G L+
Sbjct: 303 ASQKSSVKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 569 EKTGARLKIFSNSAPQSSE 625
E A+ + N Q E
Sbjct: 362 EVKVAKPEEMKNLETQEEE 380
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 32.7 bits (71), Expect = 1.1
Identities = 30/101 (29%), Positives = 49/101 (48%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 496
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 461 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 510
Query: 497 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS 619
++I Q +IG+ G +I+E+R+K + F + A +S
Sbjct: 511 DLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKS 551
>BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase
domain containing 1 protein.
Length = 865
Score = 32.3 bits (70), Expect = 1.5
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +2
Query: 389 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 568
A ++ E++KD++P E NQGG G QE + LI I G L+
Sbjct: 303 ASQKSSMKELLKDVLPQKEEI-NQGGRNYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 569 EKTGARLKIFSNSAPQSSE 625
E A+ + N Q E
Sbjct: 362 EVKVAKPEEMKNLETQEEE 380
>AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated
transcript 11 protein.
Length = 865
Score = 32.3 bits (70), Expect = 1.5
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +2
Query: 389 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 568
A ++ E++KD++P E NQGG G QE + LI I G L+
Sbjct: 303 ASQKSSMKELLKDVLPQKEEI-NQGGRNYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 569 EKTGARLKIFSNSAPQSSE 625
E A+ + N Q E
Sbjct: 362 EVKVAKPEEMKNLETQEEE 380
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 31.5 bits (68), Expect = 2.6
Identities = 29/101 (28%), Positives = 49/101 (48%)
Frame = +2
Query: 317 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 496
++ QYK S+ +P P E+ I E D V+ K + LA SR+ + E
Sbjct: 144 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRL-ENERTK 193
Query: 497 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS 619
++I Q +IG+ G +I+E+R+K + F + A +S
Sbjct: 194 DLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKS 234
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,291,983
Number of Sequences: 237096
Number of extensions: 1912602
Number of successful extensions: 7727
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 7512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7704
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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