Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6o05
         (321 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q045U0 Cluster: Acyl-ACP thioesterase; n=2; Lactobacill...    32   2.8  
UniRef50_Q9Y1L5 Cluster: S-adenosylmethionine decarboxylase-orni...    31   3.7  
UniRef50_Q8IKV0 Cluster: Putative uncharacterized protein; n=6; ...    31   6.5  
UniRef50_Q7YN59 Cluster: RNA polymerase C2; n=1; Eimeria tenella...    31   6.5  
UniRef50_Q22KE9 Cluster: Peptidase family M49 containing protein...    31   6.5  
UniRef50_A5KBY7 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_A5K1E6 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_Q6KZL7 Cluster: Hypothetical exported protein; n=1; Pic...    31   6.5  
UniRef50_UPI00006CA442 Cluster: hypothetical protein TTHERM_0049...    30   8.6  
UniRef50_Q4HLF7 Cluster: Capsular polysaccharide biosynthesis pr...    30   8.6  

>UniRef50_Q045U0 Cluster: Acyl-ACP thioesterase; n=2;
           Lactobacillus|Rep: Acyl-ACP thioesterase - Lactobacillus
           gasseri (strain ATCC 33323 / DSM 20243)
          Length = 244

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 147 KHMPRFIYLCKLMTYHCGYVYHNKYIFLSTYNNMSNNIF 263
           KHMPRF  L  L  Y     Y  +Y  L T ++++N+++
Sbjct: 137 KHMPRFKRLRPLKEYDSSQTYAVRYYDLDTNHHLTNSVY 175


>UniRef50_Q9Y1L5 Cluster: S-adenosylmethionine
           decarboxylase-ornithine decarboxylase; n=6; Plasmodium
           falciparum|Rep: S-adenosylmethionine
           decarboxylase-ornithine decarboxylase - Plasmodium
           falciparum
          Length = 1419

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
 Frame = +3

Query: 60  SCKISKF*DYYTV-LMREDHIIFFKV-TAANKHMPRFI-YLCKLMTYHCG-YVYHNKYIF 227
           SC +S+  +Y+ V    ED + +  V  ++N    RF+ ++ K + ++ G Y++   Y+F
Sbjct: 421 SCNVSEKNNYFCVHYSPEDSVSYVSVEVSSNLSCDRFLDFIHKQLNFYNGKYMFMINYVF 480

Query: 228 LSTYNNMSNNI 260
               NNMS  +
Sbjct: 481 CEESNNMSKMV 491


>UniRef50_Q8IKV0 Cluster: Putative uncharacterized protein; n=6;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 3347

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -2

Query: 158  WHMFICRRDLKEYYMVFSH*NCIIISKLTNFTGECLKGLKCDIFNI-NHLC 9
            + + +C    +EYY V+ H   +++S L  F       LKC ++N+ N+ C
Sbjct: 3072 YSIVLCNMIKQEYYTVYYHDEHLLVSFLNMFPYILATHLKCFLYNLKNNSC 3122


>UniRef50_Q7YN59 Cluster: RNA polymerase C2; n=1; Eimeria
           tenella|Rep: RNA polymerase C2 - Eimeria tenella
          Length = 1050

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 192 HCGYVYHNKYIFLSTYNNMSNNIFQSQFI*LINNGSDVLTKKK 320
           H  Y+Y N YI+++TY     N+F +++I     G  +L KKK
Sbjct: 738 HIYYIYKN-YIYITTYYTYWKNLFSNKYIFNFFRGI-ILNKKK 778


>UniRef50_Q22KE9 Cluster: Peptidase family M49 containing protein;
           n=3; Oligohymenophorea|Rep: Peptidase family M49
           containing protein - Tetrahymena thermophila SB210
          Length = 716

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +3

Query: 99  LMREDHIIFFKVTAANK-HMPRFIYLCKLMTYHCGYVYHNKYIFLSTYNNMSNNIFQSQF 275
           + +E  + F K+T A   + P+F ++ +   Y   Y YHN Y  +   NN  +  + S  
Sbjct: 119 ISKEKFLEFIKLTKAYTIYQPQFDFVWENTNYEL-YAYHNPYQIIEFINNQGHTSYYSSN 177

Query: 276 I 278
           I
Sbjct: 178 I 178


>UniRef50_A5KBY7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 2062

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 10/48 (20%), Positives = 29/48 (60%)
 Frame = +3

Query: 90  YTVLMREDHIIFFKVTAANKHMPRFIYLCKLMTYHCGYVYHNKYIFLS 233
           +T+ +  + ++FF ++  ++H+PR +      +  C   YH++++F++
Sbjct: 304 FTICLSNNELLFFDLSTDSRHLPR-LRCHNSYSRICSIFYHSEHLFVA 350


>UniRef50_A5K1E6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1561

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +3

Query: 126 FKVTAANKHMPRFIYLCKLMTYHCGYVYHN--KYIFLSTYNNMSNNIFQSQFI*LINNGS 299
           +K+    + +  + +L K   + C Y+Y N       ST+NN   NI    F  +IN  +
Sbjct: 440 YKILCGTEDIYMYFFLLKKFIFSC-YIYFNLVSIKIFSTFNNRGENIMLYDFTHIINRKN 498

Query: 300 DVL 308
             L
Sbjct: 499 TFL 501


>UniRef50_Q6KZL7 Cluster: Hypothetical exported protein; n=1;
           Picrophilus torridus|Rep: Hypothetical exported protein
           - Picrophilus torridus
          Length = 1120

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +3

Query: 78  F*DYYTVLMRED--HIIFFKVTAANKHMPRFIYLCKLMTYHCGYVYHNKYIFLSTYNNMS 251
           F DY  V ++    ++ F+ +   N  +    Y   +MTY  G +YH     LS Y N  
Sbjct: 658 FNDYINVSLKNGLYNVSFYIILRGNITVKGPEYNITIMTYKPGIIYHVNTDNLSFYGNSD 717

Query: 252 NN 257
           NN
Sbjct: 718 NN 719


>UniRef50_UPI00006CA442 Cluster: hypothetical protein
           TTHERM_00497020; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00497020 - Tetrahymena
           thermophila SB210
          Length = 547

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +3

Query: 123 FFKVTAANKHMPRFIYLCKLMTYHCGYVYHNKYIFLSTYNNMSNNIFQSQFI 278
           +FK+   NK+ P FI L ++ ++      ++  IFLST  N + NIF S  I
Sbjct: 282 YFKIYIKNKNQPLFIQLSQIDSFK----RNSLKIFLST-ENQNPNIFNSNLI 328


>UniRef50_Q4HLF7 Cluster: Capsular polysaccharide biosynthesis
           protein; n=3; Campylobacter|Rep: Capsular polysaccharide
           biosynthesis protein - Campylobacter lari RM2100
          Length = 512

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 144 NKHMPRFIYLCKLMTYHCGYVYHNKYIFLSTYNNMSNNIFQSQF 275
           N ++PRF Y  K  +Y   Y+YHN  + L  +  + + I+++ F
Sbjct: 256 NMYLPRF-YCEKAGSYRLEYLYHNTLLELFVFGKLPHYIWRNIF 298


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 265,621,597
Number of Sequences: 1657284
Number of extensions: 4669433
Number of successful extensions: 9961
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9931
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)