BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6o05
(321 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF230521-1|AAF36974.2| 185|Anopheles gambiae homeobox transcrip... 26 0.30
DQ370044-1|ABD18605.1| 99|Anopheles gambiae putative salivary ... 25 0.70
>AF230521-1|AAF36974.2| 185|Anopheles gambiae homeobox
transcription factor protein.
Length = 185
Score = 26.2 bits (55), Expect = 0.30
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 186 TYHCGYVYHNKYIFLSTYNNMSNNIFQS 269
+Y + HN+Y ++ Y+N S + FQ+
Sbjct: 130 SYPHSHYSHNQYYYMQNYSNYSQHNFQT 157
>DQ370044-1|ABD18605.1| 99|Anopheles gambiae putative salivary
secreted peptide withTIL domain protein.
Length = 99
Score = 25.0 bits (52), Expect = 0.70
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 143 CRRDLKEYYMVFS--H*NCIIISKLTNFTGECLKGLKC 36
C + +EYY S NC ++++ + TG C+ G C
Sbjct: 25 CTVENEEYYSCASPCRRNCTNLAQMLSCTGVCVSGCFC 62
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 296,268
Number of Sequences: 2352
Number of extensions: 5306
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21613350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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