Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6o05
         (321 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC026301-3|AAK68898.2|  332|Caenorhabditis elegans Hypothetical ...    26   7.0  
U49946-5|AAX55699.1|  919|Caenorhabditis elegans Diacylglycerol ...    25   9.2  
U49946-4|AAC48135.1|  952|Caenorhabditis elegans Diacylglycerol ...    25   9.2  
U49946-3|AAX55698.1|  796|Caenorhabditis elegans Diacylglycerol ...    25   9.2  
U49946-2|AAC48134.1|  950|Caenorhabditis elegans Diacylglycerol ...    25   9.2  
U49946-1|AAX55697.1|  794|Caenorhabditis elegans Diacylglycerol ...    25   9.2  

>AC026301-3|AAK68898.2|  332|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.7 protein.
          Length = 332

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 164 KSWHMFICRRDLKEYYMVFSH*NCIIISKLTNFTGE 57
           K++ ++  R D K + + FSH  C  I K+ NF+ E
Sbjct: 217 KNFEIWYSRLDSK-FILHFSHFQCFTIYKMFNFSTE 251


>U49946-5|AAX55699.1|  919|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform e protein.
          Length = 919

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 95  CIIISKLTNFTGECLKGLKCD 33
           CI+  K T F+ ECL G++C+
Sbjct: 163 CIVCRK-TCFSTECLAGMRCE 182


>U49946-4|AAC48135.1|  952|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform b protein.
          Length = 952

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 95  CIIISKLTNFTGECLKGLKCD 33
           CI+  K T F+ ECL G++C+
Sbjct: 163 CIVCRK-TCFSTECLAGMRCE 182


>U49946-3|AAX55698.1|  796|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform d protein.
          Length = 796

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 95  CIIISKLTNFTGECLKGLKCD 33
           CI+  K T F+ ECL G++C+
Sbjct: 163 CIVCRK-TCFSTECLAGMRCE 182


>U49946-2|AAC48134.1|  950|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform a protein.
          Length = 950

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 95  CIIISKLTNFTGECLKGLKCD 33
           CI+  K T F+ ECL G++C+
Sbjct: 163 CIVCRK-TCFSTECLAGMRCE 182


>U49946-1|AAX55697.1|  794|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform c protein.
          Length = 794

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 95  CIIISKLTNFTGECLKGLKCD 33
           CI+  K T F+ ECL G++C+
Sbjct: 163 CIVCRK-TCFSTECLAGMRCE 182


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,463,284
Number of Sequences: 27780
Number of extensions: 120134
Number of successful extensions: 251
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)