Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6n24
(669 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07134-1|CAA30146.1| 349|Drosophila melanogaster protein ( D. m... 109 3e-24
X07131-1|CAA30143.1| 616|Drosophila melanogaster protein ( D. m... 109 3e-24
X06742-1|CAA29917.1| 656|Drosophila melanogaster Shaker protein. 109 3e-24
M17211-1|AAA28417.1| 616|Drosophila melanogaster protein ( D.me... 109 3e-24
AE014298-2648|AAS65396.1| 349|Drosophila melanogaster CG12348-P... 109 3e-24
AE014298-2646|AAF48786.3| 655|Drosophila melanogaster CG12348-P... 109 3e-24
AE014298-2644|AAS65395.1| 616|Drosophila melanogaster CG12348-P... 109 3e-24
AE014298-2643|AAF48785.3| 616|Drosophila melanogaster CG12348-P... 109 3e-24
X07133-1|CAA30145.1| 304|Drosophila melanogaster protein ( D. m... 105 4e-23
X07132-1|CAA30144.1| 643|Drosophila melanogaster protein ( D. m... 105 4e-23
X06184-1|CAA29549.1| 304|Drosophila melanogaster protein ( Dros... 105 4e-23
AY118398-1|AAM48427.1| 571|Drosophila melanogaster RE58855p pro... 105 4e-23
AE014298-2647|AAN09452.1| 304|Drosophila melanogaster CG12348-P... 105 4e-23
AE014298-2645|AAF48790.2| 643|Drosophila melanogaster CG12348-P... 105 4e-23
AE014298-2642|AAN09451.1| 571|Drosophila melanogaster CG12348-P... 105 4e-23
M17155-1|AAA70217.1| 359|Drosophila melanogaster potassium chan... 76 4e-14
M32660-1|AAA28895.1| 490|Drosophila melanogaster protein ( D.me... 40 0.003
BT024203-1|ABC86265.1| 490|Drosophila melanogaster RE45089p pro... 40 0.003
AE014296-3172|AAF49144.2| 490|Drosophila melanogaster CG9262-PA... 40 0.003
M32659-1|AAA28896.1| 924|Drosophila melanogaster protein ( D.me... 30 2.5
AF084525-1|AAC33365.1| 955|Drosophila melanogaster delayed rect... 30 2.5
AE014296-522|ABI31231.1| 1011|Drosophila melanogaster CG1066-PC,... 30 2.5
AE014296-521|AAG22233.1| 985|Drosophila melanogaster CG1066-PA,... 30 2.5
AE014296-520|AAG22232.2| 1015|Drosophila melanogaster CG1066-PB,... 30 2.5
AY061070-1|AAL28618.1| 606|Drosophila melanogaster LD04071p pro... 30 3.3
AE014296-2547|AAF49610.2| 606|Drosophila melanogaster CG32149-P... 30 3.3
AE014296-2546|AAN11778.1| 604|Drosophila melanogaster CG32149-P... 30 3.3
AE014296-2545|AAF49609.2| 896|Drosophila melanogaster CG32149-P... 30 3.3
M32661-1|AAA28897.1| 498|Drosophila melanogaster protein ( D.me... 29 4.3
AY071475-1|AAL49097.1| 604|Drosophila melanogaster RE54962p pro... 29 4.3
AE014134-667|AAF51069.1| 498|Drosophila melanogaster CG2822-PA,... 29 4.3
AE014134-666|AAF51068.3| 604|Drosophila melanogaster CG2822-PB,... 29 4.3
M94188-1|AAC14452.1| 666|Drosophila melanogaster kinesin-like p... 28 10.0
M36195-1|AAA28653.1| 666|Drosophila melanogaster protein ( D.me... 28 10.0
AY050238-1|AAK84937.1| 666|Drosophila melanogaster SD02282p pro... 28 10.0
AE014298-1644|AAF48064.2| 666|Drosophila melanogaster CG1763-PA... 28 10.0
>X07134-1|CAA30146.1| 349|Drosophila melanogaster protein ( D.
melanogaster larvalShaker ShE mRNA for put.
K(+)-channel. ).
Length = 349
Score = 109 bits (262), Expect = 3e-24
Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +3
Query: 459 GGGSLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQF 632
G GSLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQF
Sbjct: 59 GYGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQF 118
Query: 633 PETLLGDPSRRI 668
P+TLLGDP+RR+
Sbjct: 119 PDTLLGDPARRL 130
>X07131-1|CAA30143.1| 616|Drosophila melanogaster protein ( D.
melanogaster adultShaker ShA mRNA for put. K(+)-channel.
).
Length = 616
Score = 109 bits (262), Expect = 3e-24
Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +3
Query: 459 GGGSLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQF 632
G GSLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQF
Sbjct: 59 GYGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQF 118
Query: 633 PETLLGDPSRRI 668
P+TLLGDP+RR+
Sbjct: 119 PDTLLGDPARRL 130
>X06742-1|CAA29917.1| 656|Drosophila melanogaster Shaker protein.
Length = 656
Score = 109 bits (262), Expect = 3e-24
Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +3
Query: 459 GGGSLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQF 632
G GSLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQF
Sbjct: 59 GYGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQF 118
Query: 633 PETLLGDPSRRI 668
P+TLLGDP+RR+
Sbjct: 119 PDTLLGDPARRL 130
>M17211-1|AAA28417.1| 616|Drosophila melanogaster protein (
D.melanogaster potassiumchannel (Shaker) mRNA, complete
cds. ).
Length = 616
Score = 109 bits (262), Expect = 3e-24
Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +3
Query: 459 GGGSLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQF 632
G GSLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQF
Sbjct: 59 GYGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQF 118
Query: 633 PETLLGDPSRRI 668
P+TLLGDP+RR+
Sbjct: 119 PDTLLGDPARRL 130
>AE014298-2648|AAS65396.1| 349|Drosophila melanogaster CG12348-PF,
isoform F protein.
Length = 349
Score = 109 bits (262), Expect = 3e-24
Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +3
Query: 459 GGGSLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQF 632
G GSLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQF
Sbjct: 59 GYGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQF 118
Query: 633 PETLLGDPSRRI 668
P+TLLGDP+RR+
Sbjct: 119 PDTLLGDPARRL 130
>AE014298-2646|AAF48786.3| 655|Drosophila melanogaster CG12348-PE,
isoform E protein.
Length = 655
Score = 109 bits (262), Expect = 3e-24
Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +3
Query: 459 GGGSLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQF 632
G GSLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQF
Sbjct: 59 GYGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQF 118
Query: 633 PETLLGDPSRRI 668
P+TLLGDP+RR+
Sbjct: 119 PDTLLGDPARRL 130
>AE014298-2644|AAS65395.1| 616|Drosophila melanogaster CG12348-PG,
isoform G protein.
Length = 616
Score = 109 bits (262), Expect = 3e-24
Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +3
Query: 459 GGGSLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQF 632
G GSLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQF
Sbjct: 59 GYGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQF 118
Query: 633 PETLLGDPSRRI 668
P+TLLGDP+RR+
Sbjct: 119 PDTLLGDPARRL 130
>AE014298-2643|AAF48785.3| 616|Drosophila melanogaster CG12348-PB,
isoform B protein.
Length = 616
Score = 109 bits (262), Expect = 3e-24
Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +3
Query: 459 GGGSLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQF 632
G GSLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQF
Sbjct: 59 GYGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQF 118
Query: 633 PETLLGDPSRRI 668
P+TLLGDP+RR+
Sbjct: 119 PDTLLGDPARRL 130
>X07133-1|CAA30145.1| 304|Drosophila melanogaster protein ( D.
melanogaster larvalShaker mRNA for put. K(+)-channel. ).
Length = 304
Score = 105 bits (253), Expect = 4e-23
Identities = 51/69 (73%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
Frame = +3
Query: 468 SLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQFPET 641
SLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQFP+T
Sbjct: 17 SLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPDT 76
Query: 642 LLGDPSRRI 668
LLGDP+RR+
Sbjct: 77 LLGDPARRL 85
>X07132-1|CAA30144.1| 643|Drosophila melanogaster protein ( D.
melanogaster (latepopul.) Shaker ShB mRNA for put.
K(+)-channel.).
Length = 643
Score = 105 bits (253), Expect = 4e-23
Identities = 51/69 (73%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
Frame = +3
Query: 468 SLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQFPET 641
SLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQFP+T
Sbjct: 50 SLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPDT 109
Query: 642 LLGDPSRRI 668
LLGDP+RR+
Sbjct: 110 LLGDPARRL 118
>X06184-1|CAA29549.1| 304|Drosophila melanogaster protein (
Drosophila mRNA forShaker (Sh) protein. ).
Length = 304
Score = 105 bits (253), Expect = 4e-23
Identities = 51/69 (73%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
Frame = +3
Query: 468 SLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQFPET 641
SLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQFP+T
Sbjct: 17 SLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPDT 76
Query: 642 LLGDPSRRI 668
LLGDP+RR+
Sbjct: 77 LLGDPARRL 85
>AY118398-1|AAM48427.1| 571|Drosophila melanogaster RE58855p
protein.
Length = 571
Score = 105 bits (253), Expect = 4e-23
Identities = 51/69 (73%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
Frame = +3
Query: 468 SLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQFPET 641
SLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQFP+T
Sbjct: 17 SLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPDT 76
Query: 642 LLGDPSRRI 668
LLGDP+RR+
Sbjct: 77 LLGDPARRL 85
>AE014298-2647|AAN09452.1| 304|Drosophila melanogaster CG12348-PA,
isoform A protein.
Length = 304
Score = 105 bits (253), Expect = 4e-23
Identities = 51/69 (73%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
Frame = +3
Query: 468 SLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQFPET 641
SLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQFP+T
Sbjct: 17 SLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPDT 76
Query: 642 LLGDPSRRI 668
LLGDP+RR+
Sbjct: 77 LLGDPARRL 85
>AE014298-2645|AAF48790.2| 643|Drosophila melanogaster CG12348-PC,
isoform C protein.
Length = 643
Score = 105 bits (253), Expect = 4e-23
Identities = 51/69 (73%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
Frame = +3
Query: 468 SLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQFPET 641
SLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQFP+T
Sbjct: 50 SLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPDT 109
Query: 642 LLGDPSRRI 668
LLGDP+RR+
Sbjct: 110 LLGDPARRL 118
>AE014298-2642|AAN09451.1| 571|Drosophila melanogaster CG12348-PD,
isoform D protein.
Length = 571
Score = 105 bits (253), Expect = 4e-23
Identities = 51/69 (73%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
Frame = +3
Query: 468 SLPKLSSQEED--TGRPPQSGVVTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQFPET 641
SLPKLSSQ+E+ G G FEPI HDHDFCERVVINVSGL+FETQLRTLNQFP+T
Sbjct: 17 SLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPDT 76
Query: 642 LLGDPSRRI 668
LLGDP+RR+
Sbjct: 77 LLGDPARRL 85
>M17155-1|AAA70217.1| 359|Drosophila melanogaster potassium channel
protein protein.
Length = 359
Score = 76.2 bits (179), Expect = 4e-14
Identities = 36/47 (76%), Positives = 41/47 (87%), Gaps = 2/47 (4%)
Frame = +3
Query: 534 FEPIQHDHDFCERVVIN--VSGLKFETQLRTLNQFPETLLGDPSRRI 668
FEPI HD D +RVVIN VSGL+FETQLRTLNQFP+TLLGDP+RR+
Sbjct: 116 FEPIPHDDDSAKRVVININVSGLRFETQLRTLNQFPDTLLGDPARRL 162
>M32660-1|AAA28895.1| 490|Drosophila melanogaster protein (
D.melanogaster Sha12protein mRNA, complete cds. ).
Length = 490
Score = 39.9 bits (89), Expect = 0.003
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 567 ERVVINVSGLKFETQLRTLNQFPETLLGDPSR 662
E+++INVSG +FET TL ++P+TLLG R
Sbjct: 41 EKLLINVSGRRFETWRNTLEKYPDTLLGSNER 72
>BT024203-1|ABC86265.1| 490|Drosophila melanogaster RE45089p
protein.
Length = 490
Score = 39.9 bits (89), Expect = 0.003
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 567 ERVVINVSGLKFETQLRTLNQFPETLLGDPSR 662
E+++INVSG +FET TL ++P+TLLG R
Sbjct: 41 EKLLINVSGRRFETWRNTLEKYPDTLLGSNER 72
>AE014296-3172|AAF49144.2| 490|Drosophila melanogaster CG9262-PA
protein.
Length = 490
Score = 39.9 bits (89), Expect = 0.003
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 567 ERVVINVSGLKFETQLRTLNQFPETLLGDPSR 662
E+++INVSG +FET TL ++P+TLLG R
Sbjct: 41 EKLLINVSGRRFETWRNTLEKYPDTLLGSNER 72
>M32659-1|AAA28896.1| 924|Drosophila melanogaster protein (
D.melanogaster Shab11protein mRNA, complete cds. ).
Length = 924
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLLG 650
RV INV G++ E RTL + P T LG
Sbjct: 278 RVSINVGGVRHEVLWRTLERLPHTRLG 304
>AF084525-1|AAC33365.1| 955|Drosophila melanogaster delayed
rectifier potassium channelprotein.
Length = 955
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLLG 650
RV INV G++ E RTL + P T LG
Sbjct: 278 RVSINVGGVRHEVLWRTLERLPHTRLG 304
>AE014296-522|ABI31231.1| 1011|Drosophila melanogaster CG1066-PC,
isoform C protein.
Length = 1011
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLLG 650
RV INV G++ E RTL + P T LG
Sbjct: 308 RVSINVGGVRHEVLWRTLERLPHTRLG 334
>AE014296-521|AAG22233.1| 985|Drosophila melanogaster CG1066-PA,
isoform A protein.
Length = 985
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLLG 650
RV INV G++ E RTL + P T LG
Sbjct: 308 RVSINVGGVRHEVLWRTLERLPHTRLG 334
>AE014296-520|AAG22232.2| 1015|Drosophila melanogaster CG1066-PB,
isoform B protein.
Length = 1015
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLLG 650
RV INV G++ E RTL + P T LG
Sbjct: 308 RVSINVGGVRHEVLWRTLERLPHTRLG 334
>AY061070-1|AAL28618.1| 606|Drosophila melanogaster LD04071p
protein.
Length = 606
Score = 29.9 bits (64), Expect = 3.3
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 404 SSTRVRKRLYKHADDI-GGRRRVTAEAQQPGGGHRSSTTERGRYVRTNPTRPRLLRASCH 580
SS+ ++RL + GG R T G G +S + G NPT P+L + +C
Sbjct: 472 SSSHHQRRLRTGTKSLDGGGERRTGSGAAGGSGGGASGSAVG-----NPTPPKLKQRTCS 526
Query: 581 QCERFEVRNSAA 616
+C R +R+S++
Sbjct: 527 RCNR-GIRHSSS 537
>AE014296-2547|AAF49610.2| 606|Drosophila melanogaster CG32149-PA,
isoform A protein.
Length = 606
Score = 29.9 bits (64), Expect = 3.3
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 404 SSTRVRKRLYKHADDI-GGRRRVTAEAQQPGGGHRSSTTERGRYVRTNPTRPRLLRASCH 580
SS+ ++RL + GG R T G G +S + G NPT P+L + +C
Sbjct: 472 SSSHHQRRLRTGTKSLDGGGERRTGSGAAGGSGGGASGSAVG-----NPTPPKLKQRTCS 526
Query: 581 QCERFEVRNSAA 616
+C R +R+S++
Sbjct: 527 RCNR-GIRHSSS 537
>AE014296-2546|AAN11778.1| 604|Drosophila melanogaster CG32149-PB,
isoform B protein.
Length = 604
Score = 29.9 bits (64), Expect = 3.3
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 404 SSTRVRKRLYKHADDI-GGRRRVTAEAQQPGGGHRSSTTERGRYVRTNPTRPRLLRASCH 580
SS+ ++RL + GG R T G G +S + G NPT P+L + +C
Sbjct: 472 SSSHHQRRLRTGTKSLDGGGERRTGSGAAGGSGGGASGSAVG-----NPTPPKLKQRTCS 526
Query: 581 QCERFEVRNSAA 616
+C R +R+S++
Sbjct: 527 RCNR-GIRHSSS 537
>AE014296-2545|AAF49609.2| 896|Drosophila melanogaster CG32149-PC,
isoform C protein.
Length = 896
Score = 29.9 bits (64), Expect = 3.3
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 404 SSTRVRKRLYKHADDI-GGRRRVTAEAQQPGGGHRSSTTERGRYVRTNPTRPRLLRASCH 580
SS+ ++RL + GG R T G G +S + G NPT P+L + +C
Sbjct: 472 SSSHHQRRLRTGTKSLDGGGERRTGSGAAGGSGGGASGSAVG-----NPTPPKLKQRTCS 526
Query: 581 QCERFEVRNSAA 616
+C R +R+S++
Sbjct: 527 RCNR-GIRHSSS 537
>M32661-1|AAA28897.1| 498|Drosophila melanogaster protein (
D.melanogaster Shaw2protein mRNA, complete cds. ).
Length = 498
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RVV+NV G++ ET TL + P T L
Sbjct: 11 RVVLNVGGIRHETYKATLKKIPATRL 36
>AY071475-1|AAL49097.1| 604|Drosophila melanogaster RE54962p
protein.
Length = 604
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RVV+NV G++ ET TL + P T L
Sbjct: 11 RVVLNVGGIRHETYKATLKKIPATRL 36
>AE014134-667|AAF51069.1| 498|Drosophila melanogaster CG2822-PA,
isoform A protein.
Length = 498
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RVV+NV G++ ET TL + P T L
Sbjct: 11 RVVLNVGGIRHETYKATLKKIPATRL 36
>AE014134-666|AAF51068.3| 604|Drosophila melanogaster CG2822-PB,
isoform B protein.
Length = 604
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RVV+NV G++ ET TL + P T L
Sbjct: 11 RVVLNVGGIRHETYKATLKKIPATRL 36
>M94188-1|AAC14452.1| 666|Drosophila melanogaster kinesin-like
protein protein.
Length = 666
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -2
Query: 647 EQRLRELVQCTQLSFELQTAHIDDNSLA 564
++R REL++ + + EL + HI D+SL+
Sbjct: 393 KKRARELLELEETTLELSSIHIQDSSLS 420
>M36195-1|AAA28653.1| 666|Drosophila melanogaster protein (
D.melanogaster kinesin-like protein (nod) gene, complete
cds. ).
Length = 666
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -2
Query: 647 EQRLRELVQCTQLSFELQTAHIDDNSLA 564
++R REL++ + + EL + HI D+SL+
Sbjct: 393 KKRARELLELEETTLELSSIHIQDSSLS 420
>AY050238-1|AAK84937.1| 666|Drosophila melanogaster SD02282p
protein.
Length = 666
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -2
Query: 647 EQRLRELVQCTQLSFELQTAHIDDNSLA 564
++R REL++ + + EL + HI D+SL+
Sbjct: 393 KKRARELLELEETTLELSSIHIQDSSLS 420
>AE014298-1644|AAF48064.2| 666|Drosophila melanogaster CG1763-PA
protein.
Length = 666
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -2
Query: 647 EQRLRELVQCTQLSFELQTAHIDDNSLA 564
++R REL++ + + EL + HI D+SL+
Sbjct: 393 KKRARELLELEETTLELSSIHIQDSSLS 420
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,125,380
Number of Sequences: 53049
Number of extensions: 736545
Number of successful extensions: 2196
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2180
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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