Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6n24
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-25|AAK68591.1| 609|Caenorhabditis elegans Hypothetical... 44 1e-04
Z48584-8|CAK55179.1| 435|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z48584-7|CAH04712.1| 448|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z48584-5|CAD57717.1| 501|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z48584-4|CAD57716.1| 536|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z48584-3|CAD57715.1| 524|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z48584-2|CAA88477.2| 481|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AL032639-1|CAA21638.1| 373|Caenorhabditis elegans Hypothetical ... 33 0.24
U80448-7|AAB37820.1| 260|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z68010-3|CAA92011.1| 558|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z67756-4|CAA91765.1| 558|Caenorhabditis elegans Hypothetical pr... 31 0.98
AF005246-1|AAB95119.1| 556|Caenorhabditis elegans voltage-depen... 31 0.98
AF067219-15|AAC17023.2| 802|Caenorhabditis elegans Hypothetical... 29 2.3
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical ... 28 6.9
AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical ... 28 6.9
AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical ... 28 6.9
Z54327-13|CAE48494.1| 619|Caenorhabditis elegans Hypothetical p... 27 9.1
Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical p... 27 9.1
Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical p... 27 9.1
Z54307-9|CAE48498.1| 619|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF038618-7|AAB92070.2| 227|Caenorhabditis elegans Syaptophysin ... 27 9.1
>AC084197-25|AAK68591.1| 609|Caenorhabditis elegans Hypothetical
protein Y73B6BL.19 protein.
Length = 609
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 PQSGV-VTFEPIQHDHDFCERVVINVSGLKFETQLRTLNQFPETLLG 650
PQ+ V + + + DH E++ IN+SG +FET TL +FPETLLG
Sbjct: 27 PQAPVAIQAKDLAVDHVSDEKLAINISGRRFETWKNTLEKFPETLLG 73
>Z48584-8|CAK55179.1| 435|Caenorhabditis elegans Hypothetical
protein ZK1321.2f protein.
Length = 435
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +3
Query: 513 PQSGVVTFEPIQHDHDFCERVV-INVSGLKFETQLRTLNQFPETLLGDPSRR 665
PQ G Q H + +++V INVSG++F+T TL+++P +LLGD ++R
Sbjct: 26 PQRGTPDTSSTQ-GHPYTDQIVTINVSGMRFQTFESTLSRYPNSLLGDRNKR 76
>Z48584-7|CAH04712.1| 448|Caenorhabditis elegans Hypothetical
protein ZK1321.2e protein.
Length = 448
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +3
Query: 513 PQSGVVTFEPIQHDHDFCERVV-INVSGLKFETQLRTLNQFPETLLGDPSRR 665
PQ G Q H + +++V INVSG++F+T TL+++P +LLGD ++R
Sbjct: 39 PQRGTPDTSSTQ-GHPYTDQIVTINVSGMRFQTFESTLSRYPNSLLGDRNKR 89
>Z48584-5|CAD57717.1| 501|Caenorhabditis elegans Hypothetical
protein ZK1321.2d protein.
Length = 501
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +3
Query: 513 PQSGVVTFEPIQHDHDFCERVV-INVSGLKFETQLRTLNQFPETLLGDPSRR 665
PQ G Q H + +++V INVSG++F+T TL+++P +LLGD ++R
Sbjct: 80 PQRGTPDTSSTQ-GHPYTDQIVTINVSGMRFQTFESTLSRYPNSLLGDRNKR 130
>Z48584-4|CAD57716.1| 536|Caenorhabditis elegans Hypothetical
protein ZK1321.2c protein.
Length = 536
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +3
Query: 513 PQSGVVTFEPIQHDHDFCERVV-INVSGLKFETQLRTLNQFPETLLGDPSRR 665
PQ G Q H + +++V INVSG++F+T TL+++P +LLGD ++R
Sbjct: 115 PQRGTPDTSSTQ-GHPYTDQIVTINVSGMRFQTFESTLSRYPNSLLGDRNKR 165
>Z48584-3|CAD57715.1| 524|Caenorhabditis elegans Hypothetical
protein ZK1321.2b protein.
Length = 524
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +3
Query: 513 PQSGVVTFEPIQHDHDFCERVV-INVSGLKFETQLRTLNQFPETLLGDPSRR 665
PQ G Q H + +++V INVSG++F+T TL+++P +LLGD ++R
Sbjct: 115 PQRGTPDTSSTQ-GHPYTDQIVTINVSGMRFQTFESTLSRYPNSLLGDRNKR 165
>Z48584-2|CAA88477.2| 481|Caenorhabditis elegans Hypothetical
protein ZK1321.2a protein.
Length = 481
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +3
Query: 513 PQSGVVTFEPIQHDHDFCERVV-INVSGLKFETQLRTLNQFPETLLGDPSRR 665
PQ G Q H + +++V INVSG++F+T TL+++P +LLGD ++R
Sbjct: 72 PQRGTPDTSSTQ-GHPYTDQIVTINVSGMRFQTFESTLSRYPNSLLGDRNKR 122
>AL032639-1|CAA21638.1| 373|Caenorhabditis elegans Hypothetical
protein F18A11.5 protein.
Length = 373
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 567 ERVVINVSGLKFETQLRTLNQFPETLL 647
ERV++NV G KFET + TL + +T+L
Sbjct: 20 ERVLLNVGGKKFETTVATLTRVSDTVL 46
>U80448-7|AAB37820.1| 260|Caenorhabditis elegans Hypothetical
protein F59A3.7 protein.
Length = 260
Score = 31.5 bits (68), Expect = 0.56
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +3
Query: 129 MRKIFILLLLLAEFSTSDLF----VSIICFVWVIFSMVQKAELLFRMFVMLASGTLINAL 296
+ +F++L L E S S LF VS CF++ IFS+ K++ +F + + +L+N +
Sbjct: 40 LASLFLVLKLCIESSISILFSLPFVST-CFIF-IFSLRMKSKQIFGVLAVYTIISLLNTI 97
Query: 297 FEMCI 311
F+M +
Sbjct: 98 FKMSV 102
>Z68010-3|CAA92011.1| 558|Caenorhabditis elegans Hypothetical
protein R07A4.1 protein.
Length = 558
Score = 30.7 bits (66), Expect = 0.98
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 567 ERVVINVSGLKFETQLRTLNQFPETLL 647
ER+V+NV G++ ET TL + P T L
Sbjct: 37 ERIVLNVGGVRHETYQATLKKIPATRL 63
>Z67756-4|CAA91765.1| 558|Caenorhabditis elegans Hypothetical
protein R07A4.1 protein.
Length = 558
Score = 30.7 bits (66), Expect = 0.98
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 567 ERVVINVSGLKFETQLRTLNQFPETLL 647
ER+V+NV G++ ET TL + P T L
Sbjct: 37 ERIVLNVGGVRHETYQATLKKIPATRL 63
>AF005246-1|AAB95119.1| 556|Caenorhabditis elegans
voltage-dependent potassium channelalpha subunit
protein.
Length = 556
Score = 30.7 bits (66), Expect = 0.98
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 567 ERVVINVSGLKFETQLRTLNQFPETLL 647
ER+V+NV G++ ET TL + P T L
Sbjct: 35 ERIVLNVGGVRHETYQATLKKIPATRL 61
>AF067219-15|AAC17023.2| 802|Caenorhabditis elegans Hypothetical
protein R12E2.2 protein.
Length = 802
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 557 RLLRASCHQCERFEVRNSAAYIEPIPGDVARGPL--PPN 667
R L++ C QC +V N +I PIP V + L PPN
Sbjct: 333 RQLKSVCSQCSVGKVSNLICHILPIPTRVKKNDLVKPPN 371
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical protein
W05B2.4 protein.
Length = 2265
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 453 AVGGGSLPKLSSQEEDTGRPPQS-GVVTFEPIQHDHDFCERVVIN-VSGLKFETQLRTLN 626
+V S+PKL +Q TG+PP S V E I R + V L ET TL
Sbjct: 1273 SVRTSSIPKLPAQLVSTGQPPSSPHSVLLEKI--GAKIRNREISGCVGSLAKETLKETLQ 1330
Query: 627 QFPETLL 647
FPE ++
Sbjct: 1331 NFPEKII 1337
>Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 98 FNHSTQ-NSFVNEKNIHFAVT 157
FN+ST N FVN+K HF VT
Sbjct: 295 FNYSTNDNCFVNQKKNHFQVT 315
>AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 98 FNHSTQ-NSFVNEKNIHFAVT 157
FN+ST N FVN+K HF VT
Sbjct: 295 FNYSTNDNCFVNQKKNHFQVT 315
>AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical
protein F21A10.2b protein.
Length = 947
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 98 FNHSTQ-NSFVNEKNIHFAVT 157
FN+ST N FVN+K HF VT
Sbjct: 293 FNYSTNDNCFVNQKKNHFQVT 313
>AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical
protein F21A10.2a protein.
Length = 898
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 98 FNHSTQ-NSFVNEKNIHFAVT 157
FN+ST N FVN+K HF VT
Sbjct: 244 FNYSTNDNCFVNQKKNHFQVT 264
>Z54327-13|CAE48494.1| 619|Caenorhabditis elegans Hypothetical
protein F14F11.1h protein.
Length = 619
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RV++NV G++ ET L + P T L
Sbjct: 102 RVILNVGGIRHETYSHVLKKIPATRL 127
>Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RV++NV G++ ET L + P T L
Sbjct: 56 RVILNVGGIRHETYSHVLKKIPATRL 81
>Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RV++NV G++ ET L + P T L
Sbjct: 102 RVILNVGGIRHETYSHVLKKIPATRL 127
>Z54307-9|CAE48498.1| 619|Caenorhabditis elegans Hypothetical
protein F14F11.1h protein.
Length = 619
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RV++NV G++ ET L + P T L
Sbjct: 102 RVILNVGGIRHETYSHVLKKIPATRL 127
>Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RV++NV G++ ET L + P T L
Sbjct: 56 RVILNVGGIRHETYSHVLKKIPATRL 81
>Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RV++NV G++ ET L + P T L
Sbjct: 102 RVILNVGGIRHETYSHVLKKIPATRL 127
>Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical
protein F14F11.1g protein.
Length = 513
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RV++NV G++ ET L + P T L
Sbjct: 26 RVILNVGGIRHETYSHVLKKIPATRL 51
>Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical
protein F14F11.1f protein.
Length = 510
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RV++NV G++ ET L + P T L
Sbjct: 23 RVILNVGGIRHETYSHVLKKIPATRL 48
>Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical
protein F14F11.1e protein.
Length = 516
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RV++NV G++ ET L + P T L
Sbjct: 29 RVILNVGGIRHETYSHVLKKIPATRL 54
>Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical
protein F14F11.1d protein.
Length = 503
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RV++NV G++ ET L + P T L
Sbjct: 16 RVILNVGGIRHETYSHVLKKIPATRL 41
>Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical
protein F14F11.1a protein.
Length = 493
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 570 RVVINVSGLKFETQLRTLNQFPETLL 647
RV++NV G++ ET L + P T L
Sbjct: 6 RVILNVGGIRHETYSHVLKKIPATRL 31
>AF038618-7|AAB92070.2| 227|Caenorhabditis elegans Syaptophysin
protein 1 protein.
Length = 227
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 174 TSDLFVSIICFVWVIFSMVQKAELLFRMFVMLASGTLINALFEMC 308
T+ ++V ICFV+VIF + + E + V L + L+ LF C
Sbjct: 101 TALIYVIFICFVYVIFWNIYQTEKRIPL-VDLGATALLFILFFFC 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,593,187
Number of Sequences: 27780
Number of extensions: 364292
Number of successful extensions: 1001
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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