Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6n23
(658 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130633-1|AAI30634.1| 725|Homo sapiens USP54 protein protein. 30 6.3
BC064967-1|AAH64967.1| 654|Homo sapiens USP54 protein protein. 30 6.3
AL359074-7|CAO03506.1| 1684|Homo sapiens ubiquitin specific pept... 30 6.3
AK127267-1|BAC86907.1| 767|Homo sapiens protein ( Homo sapiens ... 30 6.3
AK127213-1|BAC86886.1| 725|Homo sapiens protein ( Homo sapiens ... 30 6.3
AK127081-1|BAC86817.1| 716|Homo sapiens protein ( Homo sapiens ... 30 6.3
AK126497-1|BAC86566.1| 772|Homo sapiens protein ( Homo sapiens ... 30 6.3
BC110592-1|AAI10593.1| 891|Homo sapiens ATP9A protein protein. 30 8.3
BC110591-1|AAI10592.1| 891|Homo sapiens ATP9A protein protein. 30 8.3
BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome proliferator... 30 8.3
BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein. 30 8.3
AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome proliferator... 30 8.3
AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome proliferator... 30 8.3
AL353799-2|CAI18889.1| 911|Homo sapiens ATPase, Class II, type ... 30 8.3
AL353799-1|CAI18890.1| 1047|Homo sapiens ATPase, Class II, type ... 30 8.3
AL138807-2|CAI22924.1| 911|Homo sapiens ATPase, Class II, type ... 30 8.3
AL138807-1|CAI22925.1| 1047|Homo sapiens ATPase, Class II, type ... 30 8.3
AL035684-2|CAI19203.1| 911|Homo sapiens ATPase, Class II, type ... 30 8.3
AL035684-1|CAI19202.1| 1047|Homo sapiens ATPase, Class II, type ... 30 8.3
AK172802-1|BAD18775.1| 951|Homo sapiens protein ( Homo sapiens ... 30 8.3
AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activa... 30 8.3
AB014511-1|BAA31586.1| 912|Homo sapiens KIAA0611 protein protein. 30 8.3
AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein. 30 8.3
>BC130633-1|AAI30634.1| 725|Homo sapiens USP54 protein protein.
Length = 725
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 281 QGRNAGENVESCLLLQRTCRQDRNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ R +AQ + +DP AN SP++ + +
Sbjct: 84 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 141
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 142 GCSPSNSSAQPSLPLY 157
>BC064967-1|AAH64967.1| 654|Homo sapiens USP54 protein protein.
Length = 654
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 281 QGRNAGENVESCLLLQRTCRQDRNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ R +AQ + +DP AN SP++ + +
Sbjct: 13 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 70
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 71 GCSPSNSSAQPSLPLY 86
>AL359074-7|CAO03506.1| 1684|Homo sapiens ubiquitin specific peptidase
54 protein.
Length = 1684
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 281 QGRNAGENVESCLLLQRTCRQDRNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ R +AQ + +DP AN SP++ + +
Sbjct: 996 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 1053
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 1054 GCSPSNSSAQPSLPLY 1069
>AK127267-1|BAC86907.1| 767|Homo sapiens protein ( Homo sapiens
cDNA FLJ45334 fis, clone BRHIP3007409. ).
Length = 767
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 281 QGRNAGENVESCLLLQRTCRQDRNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ R +AQ + +DP AN SP++ + +
Sbjct: 84 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 141
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 142 GCSPSNSSAQPSLPLY 157
>AK127213-1|BAC86886.1| 725|Homo sapiens protein ( Homo sapiens
cDNA FLJ45280 fis, clone BRHIP3001360. ).
Length = 725
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 281 QGRNAGENVESCLLLQRTCRQDRNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ R +AQ + +DP AN SP++ + +
Sbjct: 84 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 141
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 142 GCSPSNSSAQPSLPLY 157
>AK127081-1|BAC86817.1| 716|Homo sapiens protein ( Homo sapiens
cDNA FLJ45138 fis, clone BRAWH3039258. ).
Length = 716
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 281 QGRNAGENVESCLLLQRTCRQDRNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ R +AQ + +DP AN SP++ + +
Sbjct: 84 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 141
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 142 GCSPSNSSAQPSLPLY 157
>AK126497-1|BAC86566.1| 772|Homo sapiens protein ( Homo sapiens
cDNA FLJ44533 fis, clone UTERU3004523. ).
Length = 772
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -3
Query: 281 QGRNAGENVESCLLLQRTCRQDRNLAQSDVNICSRDPLLANDSPLLTNMCQGFNYETEKT 102
+G+ G ++ + ++ R +AQ + +DP AN SP++ + +
Sbjct: 84 EGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDP--ANPSPVMPGIATSERGDEHSL 141
Query: 101 VCRGSNPAANPNSPQY 54
C SN +A P+ P Y
Sbjct: 142 GCSPSNSSAQPSLPLY 157
>BC110592-1|AAI10593.1| 891|Homo sapiens ATP9A protein protein.
Length = 891
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 411 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMGVWRVVHAPQ 560
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 116 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 166
>BC110591-1|AAI10592.1| 891|Homo sapiens ATP9A protein protein.
Length = 891
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 411 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMGVWRVVHAPQ 560
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 116 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 166
>BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,
coactivator-related 1 protein.
Length = 1664
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 462 ARRCSKRTAAKPPFT*SHENLESSRS-GHTPGRRRLSFAHRRHISTRYNQRHQ 307
+RRCS +++ + S + SSRS +P RR S RR+ S R + +Q
Sbjct: 1476 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRSHDHYQ 1528
>BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein.
Length = 659
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 462 ARRCSKRTAAKPPFT*SHENLESSRS-GHTPGRRRLSFAHRRHISTRYNQRHQ 307
+RRCS +++ + S + SSRS +P RR S RR+ S R + +Q
Sbjct: 481 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRSHDHYQ 533
>AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 631
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 462 ARRCSKRTAAKPPFT*SHENLESSRS-GHTPGRRRLSFAHRRHISTRYNQRHQ 307
+RRCS +++ + S + SSRS +P RR S RR+ S R + +Q
Sbjct: 443 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRSHDHYQ 495
>AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 1664
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 462 ARRCSKRTAAKPPFT*SHENLESSRS-GHTPGRRRLSFAHRRHISTRYNQRHQ 307
+RRCS +++ + S + SSRS +P RR S RR+ S R + +Q
Sbjct: 1476 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRSHDHYQ 1528
>AL353799-2|CAI18889.1| 911|Homo sapiens ATPase, Class II, type 9A
protein.
Length = 911
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 411 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMGVWRVVHAPQ 560
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 136 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 186
>AL353799-1|CAI18890.1| 1047|Homo sapiens ATPase, Class II, type 9A
protein.
Length = 1047
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 411 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMGVWRVVHAPQ 560
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 272 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 322
>AL138807-2|CAI22924.1| 911|Homo sapiens ATPase, Class II, type 9A
protein.
Length = 911
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 411 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMGVWRVVHAPQ 560
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 136 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 186
>AL138807-1|CAI22925.1| 1047|Homo sapiens ATPase, Class II, type 9A
protein.
Length = 1047
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 411 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMGVWRVVHAPQ 560
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 272 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 322
>AL035684-2|CAI19203.1| 911|Homo sapiens ATPase, Class II, type 9A
protein.
Length = 911
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 411 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMGVWRVVHAPQ 560
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 136 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 186
>AL035684-1|CAI19202.1| 1047|Homo sapiens ATPase, Class II, type 9A
protein.
Length = 1047
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 411 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMGVWRVVHAPQ 560
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 272 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 322
>AK172802-1|BAD18775.1| 951|Homo sapiens protein ( Homo sapiens
cDNA FLJ23963 fis, clone HEP15535, highly similar to
Potential phospholipid-transporting ATPase IIA (EC
3.6.1.-). ).
Length = 951
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 411 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMGVWRVVHAPQ 560
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 176 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 226
>AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activator
protein.
Length = 1664
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 462 ARRCSKRTAAKPPFT*SHENLESSRS-GHTPGRRRLSFAHRRHISTRYNQRHQ 307
+RRCS +++ + S + SSRS +P RR S RR+ S R + +Q
Sbjct: 1476 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRSHDHYQ 1528
>AB014511-1|BAA31586.1| 912|Homo sapiens KIAA0611 protein protein.
Length = 912
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 411 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMGVWRVVHAPQ 560
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 137 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 187
>AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein.
Length = 1666
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 462 ARRCSKRTAAKPPFT*SHENLESSRS-GHTPGRRRLSFAHRRHISTRYNQRHQ 307
+RRCS +++ + S + SSRS +P RR S RR+ S R + +Q
Sbjct: 1478 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRSHDHYQ 1530
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,397,653
Number of Sequences: 237096
Number of extensions: 2551458
Number of successful extensions: 10222
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10222
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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