Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6n13
         (384 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   3.8  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   5.1  
AY331403-1|AAQ97584.1|  103|Anopheles gambiae agCP14332 protein.       22   6.7  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    22   8.9  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 280 TKIYRPDNNKTDAAVNTSSPKRAVQTENDDDDDE 381
           TK    +NN +D     +S        + DDDDE
Sbjct: 758 TKADNMNNNHSDQLTGDNSADERAVPNDADDDDE 791


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 158 QCRAATIVFCAIWCKTANTILTQ 226
           Q R AT  FC +W   A+  + Q
Sbjct: 671 QVREATADFCDVWINIAHIYVEQ 693


>AY331403-1|AAQ97584.1|  103|Anopheles gambiae agCP14332 protein.
          Length = 103

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = +1

Query: 295 PDN--NKTDAAVNTSSPKRAVQTENDDDD 375
           P+N   +T       SP    QT++DDDD
Sbjct: 53  PENVRRRTRCGSLCGSPVSRAQTDDDDDD 81


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 85  GVGAHIIKVASSPQLRLLYK 144
           G+G H++     P L  +YK
Sbjct: 352 GIGTHLVTCQRQPALGCVYK 371


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.132    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 363,149
Number of Sequences: 2352
Number of extensions: 6289
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)