Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6n13
(384 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical pr... 31 0.28
AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical ... 29 1.5
Z93393-19|CAC70107.3| 971|Caenorhabditis elegans Hypothetical p... 28 2.6
Z93393-14|CAD59174.1| 155|Caenorhabditis elegans Hypothetical p... 28 2.6
Z83229-4|CAD89896.1| 971|Caenorhabditis elegans Hypothetical pr... 28 2.6
AL117195-4|CAB55010.1| 571|Caenorhabditis elegans Hypothetical ... 28 2.6
AF078783-1|AAK82900.1| 382|Caenorhabditis elegans Hypothetical ... 27 6.0
AC024826-7|AAF60797.1| 305|Caenorhabditis elegans Hypothetical ... 27 6.0
Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical p... 26 7.9
L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical pr... 26 7.9
>Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical
protein W04D2.2a protein.
Length = 332
Score = 31.1 bits (67), Expect = 0.28
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 98 ILSRWLARRNLDCCTKTPILQCRAATIVFCAIWCKTANTIL 220
IL+ WLA + CT I+ +V CA+WC + T L
Sbjct: 84 ILTGWLAMKGAVYCTHPNIIYISG--MVVCALWCSSCMTAL 122
>AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical
protein Y57A10A.7 protein.
Length = 732
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 253 LNKGQMLFQTKIYRPDNNKTDAAVNTSSPKRAVQTENDDDDD 378
L +G + K R +K ++ SPKRA +E DDDD+
Sbjct: 385 LRRGAYYRRLKTGRKSISKFSGMEHSRSPKRARISERDDDDE 426
>Z93393-19|CAC70107.3| 971|Caenorhabditis elegans Hypothetical
protein Y48E1B.14a protein.
Length = 971
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 217 LNAIMFNCAEIKLNKGQMLFQTKIYRPDNNKTDAAVNTSSPKRAVQTENDDDDD 378
L I+F + + G+ML+Q K Y + + TSS K + +DDDDD
Sbjct: 46 LAGILFAKWVFECSNGEMLYQWKDY------FNPSATTSSRKPEAEEADDDDDD 93
>Z93393-14|CAD59174.1| 155|Caenorhabditis elegans Hypothetical
protein Y48E1B.14b protein.
Length = 155
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 217 LNAIMFNCAEIKLNKGQMLFQTKIYRPDNNKTDAAVNTSSPKRAVQTENDDDDD 378
L I+F + + G+ML+Q K Y + + TSS K + +DDDDD
Sbjct: 45 LAGILFAKWVFECSNGEMLYQWKDY------FNPSATTSSRKPEAEEADDDDDD 92
>Z83229-4|CAD89896.1| 971|Caenorhabditis elegans Hypothetical
protein Y48E1B.14a protein.
Length = 971
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 217 LNAIMFNCAEIKLNKGQMLFQTKIYRPDNNKTDAAVNTSSPKRAVQTENDDDDD 378
L I+F + + G+ML+Q K Y + + TSS K + +DDDDD
Sbjct: 46 LAGILFAKWVFECSNGEMLYQWKDY------FNPSATTSSRKPEAEEADDDDDD 93
>AL117195-4|CAB55010.1| 571|Caenorhabditis elegans Hypothetical
protein Y57A10A.5 protein.
Length = 571
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +1
Query: 301 NNKTDAAVNTSSPKRAVQTENDDDD 375
++K+D+ ++SPKRA +E+DDD+
Sbjct: 293 SDKSDSDEYSTSPKRARASESDDDE 317
>AF078783-1|AAK82900.1| 382|Caenorhabditis elegans Hypothetical
protein H10E21.2 protein.
Length = 382
Score = 26.6 bits (56), Expect = 6.0
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Frame = +1
Query: 160 VSCGNYSILCNLVQNGEYDLNAIMFNCAEIKL-----NKGQMLFQTKIYRPDNNKTDAAV 324
+SC Y I+ + G + ++ + KL Q+ TKI PD+N T
Sbjct: 253 ISCAAYPIILTFINKGIRNAHSTIMTSQRKKLMTIRAGAYQVATPTKILFPDDNCTARVC 312
Query: 325 NTSSPKRAVQTEN 363
+P+R N
Sbjct: 313 ANLAPRRQYSCSN 325
>AC024826-7|AAF60797.1| 305|Caenorhabditis elegans Hypothetical
protein Y55F3AM.4 protein.
Length = 305
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 280 TKIYRPDNNKTDAAVNTSSPKRAVQTENDDDDDE 381
T Y ++ K + +++P A ++DDDD+E
Sbjct: 117 THHYEKEHEKNEEKEQSTAPPPAAPEDSDDDDEE 150
>Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical
protein R107.6 protein.
Length = 1020
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 247 IKLNKGQMLFQTKIYRPDNNKTDAAVNTSSPKRAVQTENDDDD 375
+K N G F + + + K A+NT+ + NDDD+
Sbjct: 398 VKSNLGSNSFVSSLSAEEATKLQKAMNTAKESLRQPSRNDDDE 440
>L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical
protein F44E2.7c protein.
Length = 411
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +1
Query: 250 KLNKGQMLFQTKIYRPDNNKTDAAVNTSSPKRAVQTENDDDD 375
K + + + Q +RPD +V S R + N DDD
Sbjct: 4 KTEQNRQMIQGTAHRPDEGSEILSVPASPMSRESRNRNSDDD 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.132 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,827,843
Number of Sequences: 27780
Number of extensions: 142508
Number of successful extensions: 448
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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