Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6n09
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 34 0.085
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 32 0.45
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.45
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 32 0.45
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 31 1.0
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 30 1.4
U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical pr... 30 1.4
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 30 1.8
Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical ... 29 2.4
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 29 4.2
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 29 4.2
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 29 4.2
AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical ... 29 4.2
Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical p... 28 5.6
U97592-5|AAB52873.1| 597|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 28 7.4
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 28 7.4
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 28 7.4
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 28 7.4
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 27 9.8
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 27 9.8
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 34.3 bits (75), Expect = 0.085
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 18 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYQ---KEFAPGLKPPLSSEAPSAYL 188
P+P + T+T +NP TPTT + +I +P P AP + P S+ AP+A +
Sbjct: 490 PTPVPTTTNTPPANPTTATPTT--VGTIGTSPTAPANLTTPTTAP-VNPTSSTTAPTAPV 546
Query: 189 TPSSLGMAKGVSP 227
P+S A V P
Sbjct: 547 NPTSPTTAPTVPP 559
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 31.9 bits (69), Expect = 0.45
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 15 PPSPAISATS-TRSSNPRFHTPTTPDL--TSISINPLTPYQKEFAPGLKPPLSSEAPSAY 185
P SP+ S TS + S ++PT+P TS S +P +P +P P S +PS+
Sbjct: 1607 PVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSP 1666
Query: 186 LTPSSLGMAKGVSPPY 233
S SP Y
Sbjct: 1667 SYSPSSPRYSPTSPTY 1682
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +3
Query: 18 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYQKEFAPGLKPPLSSEAPSAYLTPS 197
P+P + T+T +NP TPTT TS N ++P+ + + AP +P+
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPHLSTITGSIVTSTPTMAPQTSASPT 548
Query: 198 SLGMAKGVSPP 230
+ S P
Sbjct: 549 TTPTHTTASQP 559
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 31.9 bits (69), Expect = 0.45
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 15 PPSPAISATS-TRSSNPRFHTPTTPDL--TSISINPLTPYQKEFAPGLKPPLSSEAPSAY 185
P SP+ S TS + S ++PT+P TS S +P +P +P P S +PS+
Sbjct: 1614 PVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSP 1673
Query: 186 LTPSSLGMAKGVSPPY 233
S SP Y
Sbjct: 1674 SYSPSSPRYSPTSPTY 1689
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 15 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYQKEFAP-GLKPPLSSEAPSAYLT 191
P S I++TS+ S+ P + T T + + E ++ SS +PS + T
Sbjct: 695 PDSTIITSTSSTSTRPGTSSTATDSPTMDDTSKTSTVTSEGTTLSIESTESSASPSDFTT 754
Query: 192 PSSLGMAKGVSPPYFQVNDESQAS 263
P +G VS Q + S +S
Sbjct: 755 PDFIGFTSSVSRTSEQYSSSSPSS 778
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 1 PYASSHPPLRSRLHQPDHQIPDS 69
P +S HPPL S H +H PD+
Sbjct: 66 PTSSHHPPLNSSSHHSNHNYPDT 88
>U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical
protein F59A3.2b protein.
Length = 687
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +3
Query: 18 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYQKEFAPGLKPPLSSEAP-SAYLTP 194
P+P I R PR TP L + I+P+ +F P + PP +P A P
Sbjct: 514 PTPPIERHILR---PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNP 570
Query: 195 SSLGMAKGVSPPYFQVNDESQASRLISR 278
++L S P V ++ ++R
Sbjct: 571 TNLYPTPPSSLPNTYVPNQESFDESVNR 598
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical
protein F59A3.2a protein.
Length = 975
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +3
Query: 18 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYQKEFAPGLKPPLSSEAP-SAYLTP 194
P+P I R PR TP L + I+P+ +F P + PP +P A P
Sbjct: 514 PTPPIERHILR---PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNP 570
Query: 195 SSLGMAKGVSPPYFQVNDESQASRLISR 278
++L S P V ++ ++R
Sbjct: 571 TNLYPTPPSSLPNTYVPNQESFDESVNR 598
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 9 IKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYQKEFA-PGLKPPLSSEAP 176
+ PP PA +A + + P + + ++NP TP + P PPLSS P
Sbjct: 166 VPPPPPAATAAVSMNGGGPGSAPGSAHSVNNNVNPGTPGSNPLSNPMSNPPLSSGPP 222
>Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical
protein ZK930.7 protein.
Length = 167
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 12 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYQK 131
KPP+P+ T N + P++P T S PLT +K
Sbjct: 101 KPPAPSARTPPTIYENLAINAPSSPSATDASSVPLTFIEK 140
>AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical
protein F49F1.1 protein.
Length = 265
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +3
Query: 18 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYQKEFAPGLKPPLSSEAPS 179
P+ S ++ + P T TP+LT++++ P+T K + P +++ P+
Sbjct: 160 PATCGSCSNGTTGVPLVLTTLTPELTTVTVEPITSTLKPTTTTITPTTTTKLPT 213
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = +3
Query: 12 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYQKEFAPGLKPPLSSEAPSAYLT 191
+PP P +A S S P T + T + PYQ++ P ++ + P Y
Sbjct: 372 RPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQ--FQQHPGYYQQ 429
Query: 192 PSSLGMAKGVSPPYFQ 239
P G + + P +Q
Sbjct: 430 PMPYGQPQPMFQPQYQ 445
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = +3
Query: 12 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYQKEFAPGLKPPLSSEAPSAYLT 191
+PP P +A S S P T + T + PYQ++ P ++ + P Y
Sbjct: 756 RPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQ--FQQHPGYYQQ 813
Query: 192 PSSLGMAKGVSPPYFQ 239
P G + + P +Q
Sbjct: 814 PMPYGQPQPMFQPQYQ 829
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = +3
Query: 12 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYQKEFAPGLKPPLSSEAPSAYLT 191
+PP P +A S S P T + T + PYQ++ P ++ + P Y
Sbjct: 735 RPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQ--FQQHPGYYQQ 792
Query: 192 PSSLGMAKGVSPPYFQ 239
P G + + P +Q
Sbjct: 793 PMPYGQPQPMFQPQYQ 808
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = +3
Query: 12 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYQKEFAPGLKPPLSSEAPSAYLT 191
+PP P +A S S P T + T + PYQ++ P ++ + P Y
Sbjct: 735 RPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQ--FQQHPGYYQQ 792
Query: 192 PSSLGMAKGVSPPYFQ 239
P G + + P +Q
Sbjct: 793 PMPYGQPQPMFQPQYQ 808
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +3
Query: 15 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYQKEFAPGLKPPLSSEAPSAYLTP 194
PP+ +SA ST SS+ +TP S S+ T +K KPP + AP+ L+
Sbjct: 810 PPNKMVSAASTPSSS------STPGPASTSVGRFTNLKKIPKLSEKPPQAEFAPALGLSQ 863
Query: 195 SS 200
S
Sbjct: 864 KS 865
>AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical
protein Y41G9A.5 protein.
Length = 402
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 9 IKPPSPAISATSTRSSNPRFHTPTTPD-LTSISINPLTP 122
+ SPAI +T+T +++P+ T TP+ +T++ + P
Sbjct: 266 VSSDSPAIESTTTTTASPKTSTTLTPEPITTVPAKDVKP 304
>Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical
protein T20B3.15 protein.
Length = 349
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 451 VFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHV-SSD 627
++D +C F+ + + YD I T + LS S AS+ S R L+ + V S
Sbjct: 235 IYDETCVFNYDNYCYIPYDQINTSKQGQSICELSGSNLASIRSGNENRFLMSTVSVFSIF 294
Query: 628 SFGVYVKS*SLIL 666
+ G + S LIL
Sbjct: 295 AIGGFAFSDDLIL 307
>U97592-5|AAB52873.1| 597|Caenorhabditis elegans Hypothetical
protein C14A11.6 protein.
Length = 597
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 30 ISATSTRSSNPRFHTPTTPDLTSISINPLTPYQKEFAPGLKPPLSSEAPSAYLTPSSLGM 209
+S +STR+++ + +TP T+ +I P P E + +K + E A P+ M
Sbjct: 528 LSHSSTRTADTIAASTSTPPSTTSNITPSRPTTSEQSNTIKRKTAFEKEDA--PPAKRSM 585
Query: 210 AKGVSPPYF 236
A YF
Sbjct: 586 ATSTDDAYF 594
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 53 IKSPIPYTNHPRLNIHFHQSPDAVSE 130
I SP Y+N PR FH+ P+A+S+
Sbjct: 111 IPSPPTYSNQPRPLGDFHRDPNALSQ 136
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 3 LCIKPPSPAISATSTRSSNPRFHTPTT 83
+ ++PPSPA+SA S R R+H PT+
Sbjct: 267 ISMQPPSPAVSAFSPR----RYHHPTS 289
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 3 LCIKPPSPAISATSTRSSNPRFHTPTT 83
+ ++PPSPA+SA S R R+H PT+
Sbjct: 267 ISMQPPSPAVSAFSPR----RYHHPTS 289
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 156 PLSSEAPSAYLTPSSLGMAKGVSPP 230
P+++EAP+A PS + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 156 PLSSEAPSAYLTPSSLGMAKGVSPP 230
P+++EAP+A PS + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 174 EPLMTTEALTPARIPSDTAS 115
EP++++E L P R+PS T S
Sbjct: 877 EPILSSEVLQPTRLPSATTS 896
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 174 EPLMTTEALTPARIPSDTAS 115
EP++++E L P R+PS T S
Sbjct: 984 EPILSSEVLQPTRLPSATTS 1003
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,729,562
Number of Sequences: 27780
Number of extensions: 325674
Number of successful extensions: 1307
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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