Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6n03
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 263 2e-69
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 181 1e-44
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 173 3e-42
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 173 4e-42
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 159 8e-38
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 131 2e-29
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 96 6e-19
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 91 2e-17
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 88 2e-16
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 80 6e-14
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 71 2e-11
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 56 8e-07
UniRef50_A1JNI9 Cluster: Cytosine-specific methyltransferase; n=... 35 1.6
UniRef50_Q8IL08 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_O31630 Cluster: YjcH protein; n=3; Bacillus|Rep: YjcH p... 33 8.6
UniRef50_Q4V4E3 Cluster: IP10961p; n=4; Sophophora|Rep: IP10961p... 33 8.6
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 263 bits (645), Expect = 2e-69
Identities = 124/209 (59%), Positives = 153/209 (73%), Gaps = 1/209 (0%)
Frame = +2
Query: 59 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 238
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL RFKMS
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 239 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 418
KMVLPI+DEDDNQ+K TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQLIFHL
Sbjct: 60 KMVLPIYDEDDNQYKRTIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQLIFHL 119
Query: 419 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 598
IY+N VN IC +LK E F T V+ SVY+ TR+IL T+P +CSRV+ D++RFF
Sbjct: 120 IYDNRLEVNRICASLKNNENFIDNTYSVVESVYSATRNILSLTDPQAYCSRVANDDVRFF 179
Query: 599 DVTNA-RTHRGGVGDQLFNNYSGFLQNLI 682
D ++ G GD +FNN GFL+NLI
Sbjct: 180 DANVVDNNYQAGNGDTVFNNMPGFLRNLI 208
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 181 bits (441), Expect = 1e-44
Identities = 94/208 (45%), Positives = 126/208 (60%)
Frame = +2
Query: 59 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 238
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL RFKM
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 239 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 418
KMVLPI D D T+AR LV +K G +RIL+P+ NY V N+ ++ AEQ IFH+
Sbjct: 60 KMVLPIPDADGTALNRTLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLAEQYIFHI 119
Query: 419 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 598
IY N+ IC L+ +E F + T +V+ ++ A T +I+ PN +CSR + R +
Sbjct: 120 IYENDVERERICQMLEISERFENDTYKVVDTINARTSAIMAMVTPNRYCSRPLYTDDRIW 179
Query: 599 DVTNARTHRGGVGDQLFNNYSGFLQNLI 682
VT+ VG Q+FN FLQNLI
Sbjct: 180 SVTD----ENNVGGQVFNEMPPFLQNLI 203
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 173 bits (422), Expect = 3e-42
Identities = 85/208 (40%), Positives = 126/208 (60%)
Frame = +2
Query: 59 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 238
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H RFK+
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 239 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 418
KMVLPI D + N + T+ + LV +K G R+LIP+ NY+ V NLNSM AEQL+ H+
Sbjct: 60 KMVLPIPDAEGNIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTHM 119
Query: 419 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 598
IY+N EA +C L++ E F + T R+ ++ T +IL TNP +CS+V+ + R +
Sbjct: 120 IYDNVEAQGAVCKALQHNENFQTETYRLAEDMFNRTSAILAMTNPRRYCSQVNSNYARIW 179
Query: 599 DVTNARTHRGGVGDQLFNNYSGFLQNLI 682
+ V +F + FL+NLI
Sbjct: 180 TTDDV-----NVAGNVFESMPPFLKNLI 202
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 173 bits (420), Expect = 4e-42
Identities = 89/208 (42%), Positives = 119/208 (57%)
Frame = +2
Query: 59 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 238
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL RF+M
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 239 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 418
KMVLPI D + + ++ + L+ E R+LIP+ TNY++V L SM EQLIFH+
Sbjct: 59 KMVLPIPDAEGTIYNRSVGKSLISGTESN--RVLIPTKTNYEDVLKLPSMSLPEQLIFHM 116
Query: 419 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 598
IY+ + N IC L+Y E F S +V+ VY T +L TNP FC+RV+ + R +
Sbjct: 117 IYDEPDKQNEICKLLQYNENFHSDLYKVVERVYNKTAEVLAKTNPERFCARVNINNFRSY 176
Query: 599 DVTNARTHRGGVGDQLFNNYSGFLQNLI 682
+ + + +N GFL+NLI
Sbjct: 177 GTAD----ETDIANVTYNAMPGFLKNLI 200
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 159 bits (385), Expect = 8e-38
Identities = 84/208 (40%), Positives = 114/208 (54%)
Frame = +2
Query: 59 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 238
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H FKM
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 239 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 418
KM L I D D+ T+ R LV + E G RIL+P+ NY+ V N+ + AE LI H+
Sbjct: 60 KMSLAIPDADNKVLFRTVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEALIIHM 119
Query: 419 IYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFF 598
IY N E IC+ LK+TE F + V +Y+ T S+L+ NP+ FC+ VS LR F
Sbjct: 120 IYENLEKQKEICERLKFTEHFADRYKNV-QKLYSNTMSVLNMANPDHFCAEVSLTSLRQF 178
Query: 599 DVTNARTHRGGVGDQLFNNYSGFLQNLI 682
+ D F + F++NL+
Sbjct: 179 ---SNEIGNEPAQDTNFELFPKFIKNLV 203
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 131 bits (316), Expect = 2e-29
Identities = 70/182 (38%), Positives = 103/182 (56%), Gaps = 2/182 (1%)
Frame = +2
Query: 59 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFK 232
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL + FK
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 233 MSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIF 412
+ K + I D + + + LV + R RILIP+ NYQ V N++ + AE+L+
Sbjct: 60 IEKTSIAIPDGTGQKLYRIVGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPAERLVL 119
Query: 413 HLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELR 592
HLIYNN A IC+ L+ E F S V+ +V + I+ T+P FCS V+ +++R
Sbjct: 120 HLIYNNRTAAAEICNQLRQQENFRSD---VVENVTSMAYRIIQITDPEAFCSVVASNDIR 176
Query: 593 FF 598
F
Sbjct: 177 SF 178
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 96.3 bits (229), Expect = 6e-19
Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Frame = +2
Query: 104 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQ 277
N CIF + F C Y+ PC Y+DDG FIC HL K FKM KMV+ I +
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEKMVVRIGSGVGPE 70
Query: 278 FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICD 457
F M I + L+ +RI+IP +N+ + +M E+ +F+ IY ++ + +C
Sbjct: 71 FDMLIGKTLIQQNTEDARRIMIPLPSNFLTYLQVENMSATEKFVFYSIYERQDLIAELCR 130
Query: 458 NLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFFDVTNARTHRGGVG 637
L E +T + SV + I+ NP +C ++R FD GV
Sbjct: 131 GLVSQEYYTDDVLAKLQSVVS---HIMGLINPAIYCRPEIIRDIRSFD----NPPGNGVQ 183
Query: 638 DQLFNNYSGFLQNLI 682
+F+ FL+NLI
Sbjct: 184 TAVFDQMPPFLKNLI 198
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 91.5 bits (217), Expect = 2e-17
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
Frame = +2
Query: 80 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVL 250
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL F + KM L
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHLSMYFPLEKMTL 61
Query: 251 PIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNN 430
I FK+ I + LV ++ + I+IPS NY + +N+M AE+ I + IY
Sbjct: 62 EIPSGTGTSFKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKFIMYSIYGE 119
Query: 431 EEA-----VNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRF 595
+ +C++L+ + +T ++ +Y+ I+ NP +C + + R
Sbjct: 120 SATEPTGLITQLCESLRSQDFYTDD---MLSDLYSVVAEIMSKINPAIYCRPILNNSSRS 176
Query: 596 FDVTN 610
F T+
Sbjct: 177 FGKTS 181
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 87.8 bits (208), Expect = 2e-16
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Frame = +2
Query: 74 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM 235
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K FK+
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 236 SKMVLPIFDEDDNQ-FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIF 412
K I DN+ FKM + + L+ + + + +++ +S E++I
Sbjct: 63 LKSSFRIPSGKDNKSFKMLVGQSLLQQTDNDTNKNKVLIPLDHELYLKTSSRNSVERMII 122
Query: 413 HLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRD-EL 589
+ IYN++E + +CD L E F Q + T +I+ NP+ C R++ + E
Sbjct: 123 YTIYNDKEKIKDLCDILMKQEFF---EQPAWAAFQITLNTIMGLVNPSMLCERLTTNKEN 179
Query: 590 RFFDVTNARTHRGGVGDQLFNNYSGFLQNLI 682
R F N T+ +N +S FL+NLI
Sbjct: 180 RVF---NNETY--------YNQFSPFLKNLI 199
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 79.8 bits (188), Expect = 6e-14
Identities = 67/202 (33%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Frame = +2
Query: 104 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM--SKMVLPIFDED 268
N CIF + FD C Y CS DA + DG FICN HL K F++ SK +P D
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILKSKFEIPSGGVD 71
Query: 269 DNQFKMTIARHLVGNKERGI---KRILIP-SATNYQEVFNLNSMMQAEQLIFHLIYNNEE 436
+ FKM + + LV E+ KR+LIP S + + + S+M E+ +F+ IY +E+
Sbjct: 72 NRSFKMLVGQSLVPYAEKSTDPGKRLLIPMSVDDVRLAVSSRSLM--ERFVFYTIYEDED 129
Query: 437 AVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFFDVTNAR 616
+ ICD + E S T SV SI++ PN R F A+
Sbjct: 130 KLKSICDEITNQEEIYS-TSDTWESVNFNINSIINMATPN-----------RLFCPPKAK 177
Query: 617 THRGGVGDQLFNNYSGFLQNLI 682
D+ F FLQNL+
Sbjct: 178 MLYSYTSDESFKKLPKFLQNLV 199
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Frame = +2
Query: 104 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDN- 274
N CIF + F C Y PCS D + DG F+C+ HL + FK+ K V I +N
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKKEVFEIPSGVNNT 75
Query: 275 QFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAV 442
FK + L+ RI IP+ NY N+ +M E+ +F+ IY+ + V
Sbjct: 76 SFKYLVGVSLIQQNVPTANRITIPAKDNYYSYLNVANMSSMEKYVFYSIYDEPDTV 131
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 56.0 bits (129), Expect = 8e-07
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Frame = +2
Query: 104 NRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS-KMVLPIFDEDDNQF 280
N CIF D P + + G +IC HL F++S + + + D +
Sbjct: 28 NECIFRYARENDKLNQTIDPGYNCSNYLSGLYICQKHLEDYFRLSLRKINQLEGTDQGRV 87
Query: 281 --KMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVIC 454
++++ L N R+++P+ NY+++F + + + QL+FHL+Y N+ A++ IC
Sbjct: 88 FERLSVLSRLPHNYRN---RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQSAIDKIC 144
Query: 455 DNLK 466
++K
Sbjct: 145 QDVK 148
>UniRef50_A1JNI9 Cluster: Cytosine-specific methyltransferase; n=1;
Yersinia enterocolitica subsp. enterocolitica 8081|Rep:
Cytosine-specific methyltransferase - Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
Length = 452
Score = 35.1 bits (77), Expect = 1.6
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Frame = +2
Query: 248 LPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEV----FNLNSMMQAE-QLIF 412
L FD+ + MTIA G++ + IK+ L PS + YQ++ FN N+ + +L
Sbjct: 244 LKAFDDLSSPLAMTIAEDAPGSRFKRIKK-LPPSESKYQKLMRKEFNKNNTTPSGLRLAN 302
Query: 413 HLIY--NNEEAVNVICDNLKYTEGFTSGTQRVIHSVYA-----TTRSILDTTNPNTFCSR 571
H Y N + + V DN + + ++ R I ++YA T ++I+ +PN
Sbjct: 303 HSQYVINKFKKILVDIDNPIFQKEYSLSRGRTIPAIYANKIMNTKKAIMRVLDPNKPSVT 362
Query: 572 VSR--DELRFFDVTNARTHRGGVGDQLFNNYSGF 667
V+ D++ +D T R Q F ++ F
Sbjct: 363 VTTLPDDILHYDEPRILTVRECARLQSFPDWFDF 396
>UniRef50_Q8IL08 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 3001
Score = 34.3 bits (75), Expect = 2.8
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Frame = +2
Query: 230 KMSKMVLPIFDEDDNQFKMTIAR--HLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 403
K S + ++++N F + +L+ N+E+ +K I + T+ + V N+N+ + +
Sbjct: 897 KNSTLSTNTLNQENNIFSSSYMNKDNLLNNQEKPLKVIFGQNNTSNENVTNVNTTINSSS 956
Query: 404 L----IFHLIYNNEEAVNVICDNL-KYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCS 568
+ +F+ NN N++ N+ K G T+ + S+ + SI TT NT +
Sbjct: 957 VNNTTLFNAPNNNNNNNNILSTNVEKNLFGQTNNLLKGSSSIMFNSASISGTT--NTINN 1014
Query: 569 RVSRDELRFFDVTNARTHRGGVGDQLFNNYSGF 667
+ + N GG+ LF N + F
Sbjct: 1015 NIDNNNNNNSSSLN-NNSSGGISGGLFGNKNLF 1046
>UniRef50_O31630 Cluster: YjcH protein; n=3; Bacillus|Rep: YjcH
protein - Bacillus subtilis
Length = 240
Score = 32.7 bits (71), Expect = 8.6
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Frame = +2
Query: 173 DAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSA 352
+ YH +G KRF ++V P D++ +++ R L+G+ ++ +A
Sbjct: 86 NTYHPEG---SKFSAYKRFIAHELV-PFADDEYPTYQIGYGRTLIGDSLGATVSLM--TA 139
Query: 353 TNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEGFTS-GTQRVIHSVYATTR 529
+Y +F N +MQ+ + H++ EAV D++K+ + GT+ V+ T
Sbjct: 140 LDYPNMFG-NIIMQSPYVDKHVL----EAVKQ-SDDIKHLSIYHQIGTKET--DVHTTDG 191
Query: 530 SILDTTNPNTFCSRVSRDELRFFD 601
+ILD T PN ++ +L +D
Sbjct: 192 NILDFTEPNRELKQLLEKKLSDYD 215
>UniRef50_Q4V4E3 Cluster: IP10961p; n=4; Sophophora|Rep: IP10961p -
Drosophila melanogaster (Fruit fly)
Length = 407
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 344 PSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEG 478
PS++ Y + +N+ M+ EQ + NN+ AV + N++++ G
Sbjct: 224 PSSSRYYQQYNIQQMIPHEQYVSDPDVNNDIAVLITASNIQWSRG 268
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,928,673
Number of Sequences: 1657284
Number of extensions: 13278480
Number of successful extensions: 33439
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 32249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33401
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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