Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6m13
(386 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 177 6e-44
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 160 1e-38
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 156 1e-37
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 149 2e-35
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 145 2e-34
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 127 8e-29
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 125 3e-28
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 119 2e-26
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 116 1e-25
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 115 3e-25
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 113 1e-24
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 109 1e-23
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 107 6e-23
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 103 2e-21
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 102 3e-21
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 99 3e-20
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 79 3e-14
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 67 1e-10
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 60 1e-08
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 56 2e-07
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 53 2e-06
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 53 2e-06
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 46 3e-04
UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:... 34 1.1
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth... 33 1.9
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 33 2.5
UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1; ... 32 4.4
UniRef50_Q9BHL4 Cluster: Putative uncharacterized protein; n=3; ... 31 5.8
UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY0403... 31 5.8
UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finge... 31 7.7
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 177 bits (431), Expect = 6e-44
Identities = 82/108 (75%), Positives = 92/108 (85%)
Frame = +1
Query: 4 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 183
T+KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASVY
Sbjct: 2 TKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYEG 61
Query: 184 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 327
+ LPKLYAKLHYCVSCAIHSKVVRNRS++ R+ RTPP P M +P
Sbjct: 62 YPLPKLYAKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 160 bits (388), Expect = 1e-38
Identities = 72/97 (74%), Positives = 82/97 (84%)
Frame = +1
Query: 4 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 183
T+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+
Sbjct: 2 TKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDA 61
Query: 184 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 294
+ LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP
Sbjct: 62 YVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 156 bits (379), Expect = 1e-37
Identities = 70/112 (62%), Positives = 84/112 (75%)
Frame = +1
Query: 4 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 183
T KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIVE AA+RD+ +ASVY
Sbjct: 2 TFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEG 61
Query: 184 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 339
+ LPKLYAK YCVSCAIHS VVR RS+ +RR+RTPP R P+ Q
Sbjct: 62 YTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 149 bits (360), Expect = 2e-35
Identities = 64/97 (65%), Positives = 81/97 (83%)
Frame = +1
Query: 7 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 186
+KR + GR K GRGHVK VRC NC++ +PKDKAIK+ IRNIVEAAAVRD+++ASVYP +
Sbjct: 3 KKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEY 62
Query: 187 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 297
LPK Y KLHYCVSCAIH+++VR RS++DR+ R PP+
Sbjct: 63 ALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 145 bits (352), Expect = 2e-34
Identities = 68/112 (60%), Positives = 84/112 (75%)
Frame = +1
Query: 4 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 183
T KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIVEAAAVRDI+D S
Sbjct: 2 TSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALTK 61
Query: 184 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 339
++LPK Y KL YCVSC IH +VVR RS+ DRR R PPK + ++ QAV+
Sbjct: 62 YKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 127 bits (306), Expect = 8e-29
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = +1
Query: 130 IVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFP 309
+++ +RDIN+ASVY FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK+ FP
Sbjct: 11 LLKLLPLRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFP 70
Query: 310 RDMSRPQAVQR 342
RDM+RPQ VQR
Sbjct: 71 RDMARPQNVQR 81
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 125 bits (301), Expect = 3e-28
Identities = 62/107 (57%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
Frame = +1
Query: 16 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLP 195
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+VEAAAVRDI++ASV+ + LP
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60
Query: 196 K--LYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 330
K LY KL+YCV CAIH KVVRN K + +T P P + PQ
Sbjct: 61 KLYLYVKLNYCVRCAIHGKVVRNPPCKAHKDQTHPPRFRPSRSAAPQ 107
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 119 bits (286), Expect = 2e-26
Identities = 51/94 (54%), Positives = 68/94 (72%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQ 189
KRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V+A++ +D++DA +Y ++
Sbjct: 4 KRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQGYE 63
Query: 190 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 291
LPK Y K +YCVSCA+H VVR R+ RR R P
Sbjct: 64 LPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVP 97
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 116 bits (280), Expect = 1e-25
Identities = 59/110 (53%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM-- 183
KRRN GR K +GH VRCTNC R V KDKAIK+F RN+V+A++ RDI + Y
Sbjct: 4 KRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYAQSD 63
Query: 184 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQA 333
F +PK+Y KL YCVSCAIH+++VR RS +DRR R K R RP+A
Sbjct: 64 FTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTKL---RQHVRPEA 110
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 115 bits (277), Expect = 3e-25
Identities = 52/100 (52%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQ 189
KRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V+ ++ RDI + +
Sbjct: 82 KRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFENEK 141
Query: 190 --LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSN 303
+PKLY KL YC+SCAIHS+VVR R +DRRIR PP N
Sbjct: 142 QGIPKLYVKLQYCISCAIHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 113 bits (271), Expect = 1e-24
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +1
Query: 31 AKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 210
AK G GHV+ V C + A C+PKDKAIK F+I+NI+EAAAVRDI+ A+V+ + LP LY K
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70
Query: 211 LHYCVSCAIHSKVVRNRSKKDRRIRTP 291
LHYCVSCAIHS+VVRN K RR P
Sbjct: 71 LHYCVSCAIHSEVVRNHLLKLRRTEHP 97
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 109 bits (263), Expect = 1e-23
Identities = 49/58 (84%), Positives = 55/58 (94%)
Frame = +1
Query: 4 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 177
T+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 2 TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 107 bits (258), Expect = 6e-23
Identities = 53/105 (50%), Positives = 71/105 (67%), Gaps = 4/105 (3%)
Frame = +1
Query: 4 TRKRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS-V 174
T KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R +++AA+ RD+ +AS V
Sbjct: 2 TTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASPV 61
Query: 175 Y-PMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNF 306
Y F +PKLY K +C++CAIHS+ VR R +R+IR K F
Sbjct: 62 YGANFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 103 bits (246), Expect = 2e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +1
Query: 52 VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 231
VK V C + VPKDKA+++F++RNIVE+AA+RD+ ++ + + LPKLY K++Y +S
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 232 AIHSKVVRNRSKKDRRIRTPPK 297
AIHSKVVR RS++ RRIR PPK
Sbjct: 187 AIHSKVVRVRSREARRIRDPPK 208
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 102 bits (244), Expect = 3e-21
Identities = 44/94 (46%), Positives = 67/94 (71%)
Frame = +1
Query: 4 TRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 183
T+KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV+ +++RD+ D+ +Y
Sbjct: 2 TKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYEY 61
Query: 184 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 285
+ +PKLY K + + AIH+++VR RSK DR+ R
Sbjct: 62 YTMPKLYYKNTFSIESAIHNRIVRVRSKADRKKR 95
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 98.7 bits (235), Expect = 3e-20
Identities = 41/91 (45%), Positives = 63/91 (69%)
Frame = +1
Query: 13 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL 192
RRN GR K RG +++C C PKDKAIK+F I++++E A+ D+ A++Y +F++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 193 PKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 285
P++ K +CVSCA H+K+VR RS + R+IR
Sbjct: 62 PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 79.0 bits (186), Expect = 3e-14
Identities = 36/92 (39%), Positives = 56/92 (60%)
Frame = +1
Query: 7 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 186
+KRRN GR+K+ RGHV + C + VP+DKAIKK ++++ ++D + V P +
Sbjct: 3 KKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLPGY 62
Query: 187 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRI 282
+ PKLY+ + Y +S A K ++ KK RRI
Sbjct: 63 KAPKLYSYVFYSISSAFSQKFIKPGRKKYRRI 94
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 66.9 bits (156), Expect = 1e-10
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +1
Query: 43 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKL 213
R +V+ + NC + +PKDKA KKFV RNIVEAAAVRDI +A+V LPK Y KL
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 60.1 bits (139), Expect = 1e-08
Identities = 31/108 (28%), Positives = 55/108 (50%)
Frame = +1
Query: 7 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 186
+KR+N GR K +G V C NC + +P+ KA++ V + + +++
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI--- 63
Query: 187 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 330
+P+ Y YCV+CAI+ +++ RS+ +R+ + P R RPQ
Sbjct: 64 -VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKP----ILRGQQRPQ 106
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 56.0 bits (129), Expect = 2e-07
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Frame = +1
Query: 7 RKRRNGGRAKHGR--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 177
R RR+ G+ K GR G + V+ N C+ KDKA KFVI+NIVEAAA+R
Sbjct: 3 RMRRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR-------- 53
Query: 178 PMFQLPKLYAKLHYCVSCAIHSKV 249
Y KLH CVSCAIH KV
Sbjct: 54 -------FYVKLHCCVSCAIHIKV 70
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 53.2 bits (122), Expect = 2e-06
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +1
Query: 7 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI-NDASVYPM 183
+KR + GR K +G V+C NC R VP DKAI + + V+ ++ ++
Sbjct: 3 KKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAIIMR 62
Query: 184 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRR 279
+ + K YCVSCA+H +V+ R ++ R+
Sbjct: 63 YPVTKC-----YCVSCAVHYGIVKIRPEEQRK 89
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 52.8 bits (121), Expect = 2e-06
Identities = 24/95 (25%), Positives = 49/95 (51%)
Frame = +1
Query: 7 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 186
+KR+N GR K +G + C NC + +P+ KA++ V + V R++
Sbjct: 3 KKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI--- 59
Query: 187 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 291
+ + YC++CA+ +++ RS+++R+ + P
Sbjct: 60 -ISRYLVTKTYCINCAVFFGIIKVRSREERKKKIP 93
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 46.0 bits (104), Expect = 3e-04
Identities = 31/89 (34%), Positives = 42/89 (47%)
Frame = -3
Query: 300 TLGRSTDSSVFLRSVPDNFAVDGA*HAXXXXXXXXXXXEHWVYRGIVNISDRRRFYDVPN 121
+L RS+DSSV S +N +VD A + V RG ISD F DV +
Sbjct: 30 SLWRSSDSSVSSGSDSNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSD 89
Query: 120 HELFDSLVLWHAPRAVCASHSFNVTTSML 34
D LVLW+ V S +VT+++L
Sbjct: 90 SHSLDGLVLWNRSGTVDTSDRLDVTSTLL 118
>UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:
NEQ043 - Nanoarchaeum equitans
Length = 84
Score = 33.9 bits (74), Expect = 1.1
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 55 KAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCA 234
K VRC C R +PK+KA + N+ ++++ V +F + K++ C SCA
Sbjct: 11 KTVRCYYCGRILPKEKAYVIYTKPNV-----AGELSENEVIAVFSQKR---KIYVCPSCA 62
Query: 235 IHSKVVRNRSK 267
H + +R +
Sbjct: 63 RHRGIKDHRKE 73
>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
Methanopyrus kandleri|Rep: Zn-ribbon containing protein
- Methanopyrus kandleri
Length = 87
Score = 33.1 bits (72), Expect = 1.9
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +1
Query: 7 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 186
RK R+G + RG V C C VP+ KAI I + + ++D V+
Sbjct: 7 RKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAIPWTQGFRITDPVVRQAVDDRYVHTFS 66
Query: 187 QLPKLYAKLHYCVSCA 234
+ K++YC CA
Sbjct: 67 R------KVYYCPKCA 76
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 32.7 bits (71), Expect = 2.5
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +1
Query: 64 RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 210
R N ++C+PKDK++ ++V N ++ +RDI +VY + + KL K
Sbjct: 170 RGINESKCIPKDKSLNEYVENNPIK-FTIRDI--VTVYSISDIKKLMMK 215
>UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 3588
Score = 31.9 bits (69), Expect = 4.4
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +1
Query: 37 HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLH 216
+G + VR TN RC+ K +K NI+ + + S M+ LP+
Sbjct: 2245 NGSEGLSEVRVTN--RCIMCGKLVK-----NIISTENKEEQDGTSEVVMYSLPQTTGVWA 2297
Query: 217 YCVSCAIHSKVVRNRSKK 270
CV+C +SK + N K+
Sbjct: 2298 LCVACEAYSKYLENLCKE 2315
>UniRef50_Q9BHL4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 430
Score = 31.5 bits (68), Expect = 5.8
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +1
Query: 49 HVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL-PKLYAKLHYCV 225
H+K ++C NC+ +K+++ +IR+ E A ++ A +L P K H
Sbjct: 198 HLKEIQCDNCSLVFQSEKSLQSHIIRHHQEDADELEVWKAPCSICKELFPSTSVKTHEWY 257
Query: 226 SCAIHSKVV-RNRSKKDRRIRTPPKS 300
C K++ + R K ++++ P S
Sbjct: 258 -CKNREKIIEKQRVSKILKVQSLPSS 282
>UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY04032;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04032 - Plasmodium yoelii yoelii
Length = 1508
Score = 31.5 bits (68), Expect = 5.8
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +1
Query: 88 VPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAI-HSKVVRNRS 264
V K + +K I+ I+ A+ +IND + MF + + CV+ I H+ + RN +
Sbjct: 589 VEKKRCEQKLDIKKIINNDALTNINDLEIRKMFDSSEYNTEKINCVTGDICHTTMFRNNN 648
Query: 265 -----KKDRRIRT 288
KKD++I++
Sbjct: 649 SNHEEKKDKKIKS 661
>UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finger
protein 646; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to Zinc finger protein 646 - Monodelphis
domestica
Length = 1709
Score = 31.1 bits (67), Expect = 7.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 10 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKK 114
+RR GR + G G AVRC C +P+ ++++
Sbjct: 1386 RRRRAGRVRRGGGPRVAVRCALCGHSLPRRGSLER 1420
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,141,170
Number of Sequences: 1657284
Number of extensions: 5615003
Number of successful extensions: 15270
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15258
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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