Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6m04
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    26   0.36 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   5.8  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
 Frame = -3

Query: 427 CPRGFHFLGCSS-VNLYRKNPKLGSKVYGLLCPIPSGRGTTCPRGFHFLGC 278
           C  GF    C S VN    +P       G+   I +G   TCP GF+   C
Sbjct: 326 CKLGFMGRHCESKVNFCATSPCQNG---GVCTTIHAGHKCTCPEGFYGKNC 373



 Score = 25.0 bits (52), Expect = 0.62
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
 Frame = -3

Query: 451 IPSGRGTTCPRGFHFLGCS-SVNLYRKNPKLGSKVY------GLLCPIPSG-RGTTC 305
           I +G   TCP GF+   C  S      NP     V       G +C  PSG  GT C
Sbjct: 356 IHAGHKCTCPEGFYGKNCEFSGYDCDSNPCQNGGVCRISDGGGYICDCPSGTNGTNC 412


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 651 GELKKPIAFTAMNFTNISLATY 716
           G+L+KPI F   N  ++ L T+
Sbjct: 302 GQLEKPIVFYVANIFSLDLDTF 323


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +1

Query: 187 KNPKNLQF*S-PKCHTPSTRVSDFSGTN*QSCSLKSGNRVDTWS 315
           +N KN +F   P+          F   N  SC   +GNR D WS
Sbjct: 16  RNLKNAEFNGLPEEKLLDALCQSFRKQNSSSCG--NGNRCDLWS 57


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 296  TAWTRGPPSTRNWTKQAIHLRPEFRIFPVQIDR 394
            T  T   P+T NW  Q   + P   + P ++D+
Sbjct: 1067 TTSTTTRPTTTNWPTQGTTIPPPAVVMP-EVDK 1098


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2

Query: 542 TNTAFLFVLKRTLRTVCCSKLATVPITAL 456
           T+TAF+F LK+    V   K A V  TAL
Sbjct: 112 TSTAFVFRLKQLNAKVEMLKNARVKNTAL 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,761
Number of Sequences: 336
Number of extensions: 3847
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)