Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6m04
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    33   0.009
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    32   0.016
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             26   1.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.6  

>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 33.1 bits (72), Expect = 0.009
 Identities = 15/60 (25%), Positives = 31/60 (51%)
 Frame = +2

Query: 485 LSSKLFLVSALIQIGMLCWYADDIFHANGDVATAAFNSGWYRTSPKCRRSLLFLIRRAQK 664
           + S +F++  L Q+    W+A+++   +  +  A +N  W       R+ L+ +I RAQ+
Sbjct: 285 IGSYIFMI--LSQMFAFYWHANEVLEQSLGIGDAIYNGAWPDFEEPIRKRLILIIARAQR 342


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 32.3 bits (70), Expect = 0.016
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +2

Query: 497 LFLVSALIQIGMLCWYADDIFHANG--DVATAAFNSGWYRTSPKCRRSLLFLIRRAQK 664
           LF++  +   G  C++  D+        +  AA+ S WYR S   +R L  +++RAQK
Sbjct: 300 LFILLTVETYGF-CYFGSDLTSEASCYSLTRAAYGSLWYRRSVSIQRKLRMVLQRAQK 356


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -2

Query: 569  RSHEKYHLRTNTAFLFVLKRTLRTVCCSKLATVPITALSN 450
            R+H  Y ++T   ++F+    L  V C     VP  +L N
Sbjct: 908  RAHRNYMVQTEDQYIFIHDALLEAVICGS-TEVPARSLHN 946


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 338 KQAIHLRPEFRIFPVQIDRAA 400
           K+   +RPEF IF  Q+D  +
Sbjct: 448 KRTSKIRPEFVIFDPQVDEVS 468


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,822
Number of Sequences: 2352
Number of extensions: 15580
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)