Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6m03
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 407 e-113
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 407 e-113
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 407 e-113
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 407 e-113
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 407 e-113
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 407 e-113
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 407 e-113
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 407 e-113
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 407 e-113
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 407 e-113
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 407 e-113
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 406 e-113
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 406 e-113
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 402 e-112
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 264 2e-70
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 225 1e-58
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 208 1e-53
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 183 7e-46
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 167 5e-41
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 35 0.27
U05321-1|AAB60375.1| 613|Homo sapiens X-linked PEST-containing ... 34 0.62
U05315-1|AAB60374.1| 598|Homo sapiens X-linked PEST-containing ... 34 0.62
AL157934-1|CAI40762.2| 613|Homo sapiens solute carrier family 1... 34 0.62
AB085789-1|BAC76827.1| 539|Homo sapiens X-linked PEST-containin... 34 0.62
Z50194-1|CAA90576.1| 400|Homo sapiens PQ-rich protein protein. 32 2.5
BC130427-1|AAI30428.1| 312|Homo sapiens PHLDA1 protein protein. 32 2.5
BC126425-1|AAI26426.2| 259|Homo sapiens PHLDA1 protein protein. 32 2.5
BC110820-1|AAI10821.1| 259|Homo sapiens PHLDA1 protein protein. 32 2.5
BC018929-1|AAH18929.3| 259|Homo sapiens PHLDA1 protein protein. 32 2.5
AF239986-1|AAF64165.1| 400|Homo sapiens apoptosis-associated nu... 32 2.5
Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein. 31 5.8
BC111855-1|AAI11856.1| 197|Homo sapiens transmembrane protein 5... 31 5.8
BC104444-1|AAI04445.1| 197|Homo sapiens transmembrane protein 5... 31 5.8
BC061908-1|AAH61908.1| 176|Homo sapiens TMEM58 protein protein. 31 5.8
BC009558-1|AAH09558.1| 228|Homo sapiens TMEM58 protein protein. 31 5.8
AY453840-1|AAR24087.1| 538|Homo sapiens atherin protein. 31 5.8
AL513217-1|CAH72277.1| 197|Homo sapiens transmembrane protein 5... 31 5.8
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi... 31 5.8
AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor co-rep... 30 7.7
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 407 bits (1003), Expect = e-113
Identities = 201/241 (83%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 386
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 387 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 566
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 567 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQP 740
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQP
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQP 239
Query: 741 V 743
V
Sbjct: 240 V 240
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 407 bits (1003), Expect = e-113
Identities = 201/241 (83%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 386
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 387 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 566
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 567 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQP 740
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQP
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQP 239
Query: 741 V 743
V
Sbjct: 240 V 240
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 407 bits (1003), Expect = e-113
Identities = 201/241 (83%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 386
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 387 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 566
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 567 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQP 740
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQP
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQP 239
Query: 741 V 743
V
Sbjct: 240 V 240
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 407 bits (1003), Expect = e-113
Identities = 201/241 (83%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 386
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 387 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 566
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 567 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQP 740
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQP
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQP 239
Query: 741 V 743
V
Sbjct: 240 V 240
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 407 bits (1003), Expect = e-113
Identities = 201/241 (83%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 386
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 387 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 566
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 567 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQP 740
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQP
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQP 239
Query: 741 V 743
V
Sbjct: 240 V 240
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 407 bits (1003), Expect = e-113
Identities = 201/241 (83%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 386
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 387 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 566
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 567 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQP 740
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQP
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQP 239
Query: 741 V 743
V
Sbjct: 240 V 240
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 407 bits (1003), Expect = e-113
Identities = 201/241 (83%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 386
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 387 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 566
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 567 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQP 740
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQP
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQP 239
Query: 741 V 743
V
Sbjct: 240 V 240
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 407 bits (1003), Expect = e-113
Identities = 201/241 (83%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 386
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 387 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 566
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 567 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQP 740
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQP
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQP 239
Query: 741 V 743
V
Sbjct: 240 V 240
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 407 bits (1003), Expect = e-113
Identities = 201/241 (83%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 386
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 387 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 566
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 567 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQP 740
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQP
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQP 239
Query: 741 V 743
V
Sbjct: 240 V 240
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 407 bits (1001), Expect = e-113
Identities = 198/236 (83%), Positives = 211/236 (89%), Gaps = 2/236 (0%)
Frame = +3
Query: 42 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 221
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 222 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 401
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 402 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 581
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 582 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQPV 743
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQPV
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQPV 239
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 407 bits (1001), Expect = e-113
Identities = 198/236 (83%), Positives = 211/236 (89%), Gaps = 2/236 (0%)
Frame = +3
Query: 42 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 221
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 222 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 401
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 402 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 581
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 582 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQPV 743
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQPV
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQPV 239
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 406 bits (1000), Expect = e-113
Identities = 200/241 (82%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 386
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 387 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 566
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 567 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQP 740
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQP
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQP 239
Query: 741 V 743
V
Sbjct: 240 V 240
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 406 bits (999), Expect = e-113
Identities = 200/241 (82%), Positives = 214/241 (88%), Gaps = 2/241 (0%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 386
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 387 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 566
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 567 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQP 740
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQP
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQP 239
Query: 741 V 743
V
Sbjct: 240 V 240
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 402 bits (990), Expect = e-112
Identities = 199/241 (82%), Positives = 212/241 (87%), Gaps = 2/241 (0%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 386
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRAC 119
Query: 387 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 566
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 567 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAP--APLPQP 740
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P +PQP
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPELPAMPQP 239
Query: 741 V 743
V
Sbjct: 240 V 240
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 264 bits (647), Expect = 2e-70
Identities = 127/155 (81%), Positives = 135/155 (87%), Gaps = 2/155 (1%)
Frame = +3
Query: 285 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 464
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 465 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQP 644
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 645 DHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQPV 743
DH+ + EPKDE +P P SE + P P +PQPV
Sbjct: 121 DHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQPV 155
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 225 bits (551), Expect = 1e-58
Identities = 110/127 (86%), Positives = 116/127 (91%)
Frame = +3
Query: 213 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 392
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 393 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 572
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 573 LGIKVKI 593
V +
Sbjct: 126 WDTSVHL 132
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 208 bits (509), Expect = 1e-53
Identities = 105/118 (88%), Positives = 111/118 (94%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 380
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 183 bits (445), Expect = 7e-46
Identities = 87/114 (76%), Positives = 94/114 (82%), Gaps = 2/114 (1%)
Frame = +3
Query: 408 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 587
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 588 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAP--LPQPV 743
KIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P P +PQPV
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQPV 114
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 167 bits (405), Expect = 5e-41
Identities = 84/96 (87%), Positives = 89/96 (92%)
Frame = +3
Query: 27 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 207 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRG 314
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRG
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 35.1 bits (77), Expect = 0.27
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +2
Query: 551 CASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPR 691
CAS RS R Q Q P P A RP PG+ APR
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160
>U05321-1|AAB60375.1| 613|Homo sapiens X-linked PEST-containing
transporter protein.
Length = 613
Score = 33.9 bits (74), Expect = 0.62
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = +3
Query: 600 PW---DQQGKNGPKKPQPDHILVTEPKDEPVPL---EPTSEVRSLA-PAPLPQ 737
PW DQ+ + P+P+ EP+ EPVP+ EP E + L PAPLP+
Sbjct: 88 PWQEADQEQQEPVGSPEPESEPEPEPEPEPVPVPPPEPQPEPQPLPDPAPLPE 140
>U05315-1|AAB60374.1| 598|Homo sapiens X-linked PEST-containing
transporter protein.
Length = 598
Score = 33.9 bits (74), Expect = 0.62
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = +3
Query: 600 PW---DQQGKNGPKKPQPDHILVTEPKDEPVPL---EPTSEVRSLA-PAPLPQ 737
PW DQ+ + P+P+ EP+ EPVP+ EP E + L PAPLP+
Sbjct: 73 PWQEADQEQQEPVGSPEPESEPEPEPEPEPVPVPPPEPQPEPQPLPDPAPLPE 125
>AL157934-1|CAI40762.2| 613|Homo sapiens solute carrier family 16,
member 2 (monocarboxylic acid transporter 8) protein.
Length = 613
Score = 33.9 bits (74), Expect = 0.62
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = +3
Query: 600 PW---DQQGKNGPKKPQPDHILVTEPKDEPVPL---EPTSEVRSLA-PAPLPQ 737
PW DQ+ + P+P+ EP+ EPVP+ EP E + L PAPLP+
Sbjct: 88 PWQEADQEQQEPVGSPEPESEPEPEPEPEPVPVPPPEPQPEPQPLPDPAPLPE 140
>AB085789-1|BAC76827.1| 539|Homo sapiens X-linked PEST-containing
transporter protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.62
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = +3
Query: 600 PW---DQQGKNGPKKPQPDHILVTEPKDEPVPL---EPTSEVRSLA-PAPLPQ 737
PW DQ+ + P+P+ EP+ EPVP+ EP E + L PAPLP+
Sbjct: 14 PWQEADQEQQEPVGSPEPESEPEPEPEPEPVPVPPPEPQPEPQPLPDPAPLPE 66
>Z50194-1|CAA90576.1| 400|Homo sapiens PQ-rich protein protein.
Length = 400
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +3
Query: 561 RQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQP 740
RQ +L +K + P +PQP L +P+ +P P P P PQP
Sbjct: 285 RQAILAVKSTRQKQQHLVQQQPPSQPQPQPQLQPQPQPQPQPQPQPQSQPQPQPQPKPQP 344
>BC130427-1|AAI30428.1| 312|Homo sapiens PHLDA1 protein protein.
Length = 312
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +3
Query: 561 RQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQP 740
RQ +L +K + P +PQP L +P+ +P P P P PQP
Sbjct: 197 RQAILAVKSTRQKQQHLVQQQPPSQPQPQPQLQPQPQPQPQPQPQPQSQPQPQPQPKPQP 256
>BC126425-1|AAI26426.2| 259|Homo sapiens PHLDA1 protein protein.
Length = 259
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +3
Query: 561 RQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQP 740
RQ +L +K + P +PQP L +P+ +P P P P PQP
Sbjct: 144 RQAILAVKSTRQKQQHLVQQQPPSQPQPQPQLQPQPQPQPQPQPQPQSQPQPQPQPKPQP 203
>BC110820-1|AAI10821.1| 259|Homo sapiens PHLDA1 protein protein.
Length = 259
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +3
Query: 561 RQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQP 740
RQ +L +K + P +PQP L +P+ +P P P P PQP
Sbjct: 144 RQAILAVKSTRQKQQHLVQQQPPSQPQPQPQLQPQPQPQPQPQPQPQSQPQPQPQPKPQP 203
>BC018929-1|AAH18929.3| 259|Homo sapiens PHLDA1 protein protein.
Length = 259
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +3
Query: 561 RQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQP 740
RQ +L +K + P +PQP L +P+ +P P P P PQP
Sbjct: 144 RQAILAVKSTRQKQQHLVQQQPPSQPQPQPQLQPQPQPQPQPQPQPQSQPQPQPQPKPQP 203
>AF239986-1|AAF64165.1| 400|Homo sapiens apoptosis-associated
nuclear protein protein.
Length = 400
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +3
Query: 561 RQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQP 740
RQ +L +K + P +PQP L +P+ +P P P P PQP
Sbjct: 285 RQAILAVKSTRQKQQHLVQQQPPSQPQPQPQLQPQPQPQPQPQPQPQSQPQPQPQPKPQP 344
>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
Length = 3851
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 615 GKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQPVA 746
G GP +P+ + V ++EP+P + ++ A AP P P+A
Sbjct: 2217 GAGGPSRPE---MPVGAAREEPLPTTTPAAIKEAAGAPAPAPLA 2257
>BC111855-1|AAI11856.1| 197|Homo sapiens transmembrane protein 58
protein.
Length = 197
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = +3
Query: 576 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE--VRSLAPAPL--PQP 740
GI V+ + P+ Q K GP PQP I PL P AP P PQP
Sbjct: 134 GIPVQPVYPYPQDPKAGPAPPQPGFIYPPSGPAPQYPLYPAGPPVYNPAAPPPYMPPQP 192
>BC104444-1|AAI04445.1| 197|Homo sapiens transmembrane protein 58
protein.
Length = 197
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = +3
Query: 576 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE--VRSLAPAPL--PQP 740
GI V+ + P+ Q K GP PQP I PL P AP P PQP
Sbjct: 134 GIPVQPVYPYPQDPKAGPAPPQPGFIYPPSGPAPQYPLYPAGPPVYNPAAPPPYMPPQP 192
>BC061908-1|AAH61908.1| 176|Homo sapiens TMEM58 protein protein.
Length = 176
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = +3
Query: 576 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE--VRSLAPAPL--PQP 740
GI V+ + P+ Q K GP PQP I PL P AP P PQP
Sbjct: 113 GIPVQPVYPYPQDPKAGPAPPQPGFIYPPSGPAPQYPLYPAGPPVYNPAAPPPYMPPQP 171
>BC009558-1|AAH09558.1| 228|Homo sapiens TMEM58 protein protein.
Length = 228
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = +3
Query: 576 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE--VRSLAPAPL--PQP 740
GI V+ + P+ Q K GP PQP I PL P AP P PQP
Sbjct: 165 GIPVQPVYPYPQDPKAGPAPPQPGFIYPPSGPAPQYPLYPAGPPVYNPAAPPPYMPPQP 223
>AY453840-1|AAR24087.1| 538|Homo sapiens atherin protein.
Length = 538
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3
Query: 624 GPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQP 740
GP++ P + EP P P P + P P PQP
Sbjct: 195 GPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQP 233
>AL513217-1|CAH72277.1| 197|Homo sapiens transmembrane protein 58
protein.
Length = 197
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = +3
Query: 576 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE--VRSLAPAPL--PQP 740
GI V+ + P+ Q K GP PQP I PL P AP P PQP
Sbjct: 134 GIPVQPVYPYPQDPKAGPAPPQPGFIYPPSGPAPQYPLYPAGPPVYNPAAPPPYMPPQP 192
>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
protein protein.
Length = 3926
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 615 GKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQPVA 746
G GP +P+ + V ++EP+P + ++ A AP P P+A
Sbjct: 2292 GAGGPSRPE---MPVGAAREEPLPTTTPAAIKEAAGAPAPAPLA 2332
>AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor
co-repressor 2 variant protein.
Length = 1469
Score = 30.3 bits (65), Expect = 7.7
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 8/50 (16%)
Frame = +3
Query: 615 GKNGPKKPQ-------PDHILVTEPKDEPVPLEPTSEVRSL-APAPLPQP 740
G+NGPK P P P+D P P EPT + AP P P P
Sbjct: 781 GQNGPKPPATLGADGPPPEPPTPPPEDIPAPTEPTPASEATGAPTPPPAP 830
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,469,685
Number of Sequences: 237096
Number of extensions: 2855451
Number of successful extensions: 13290
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 11998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13210
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -