Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6l17
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070984-1|AAL48606.1|  224|Drosophila melanogaster RE07960p pro...   114   9e-26
AE014296-2486|AAN11795.1|  224|Drosophila melanogaster CG32147-P...   114   9e-26

>AY070984-1|AAL48606.1|  224|Drosophila melanogaster RE07960p
           protein.
          Length = 224

 Score =  114 bits (275), Expect = 9e-26
 Identities = 79/210 (37%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
 Frame = +3

Query: 3   VTGFGPFANHP-VNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPALWETHT 179
           V+GFGPF  H  VNASWEAVKLL +    +    +L    + V Y  VDE V  +W+   
Sbjct: 11  VSGFGPFLGHEAVNASWEAVKLLPEILTHDGIEYDLEKRLVSVEYGAVDEAVAEIWKRQ- 69

Query: 180 PKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANHVCTADG---AVRIHTKLNVE 350
           P L+IHVGVS +A  + +E  A+   ++R D  DK  AN  C       A  + T+L+V+
Sbjct: 70  PYLVIHVGVSGVAKCVYIEKLAYNHKFRRADNCDKKLANGTCELPNNGHANVLKTELDVD 129

Query: 351 RICKEFNDASPE-----------DSTRAVS----SKDAGRYLCEYIYYTSLSVDNSRTLF 485
           +I    N+   +           D+ +++S    SK+ G +LC YIY  SL +D  R+LF
Sbjct: 130 KIVAVVNENCADCVGPTQQPTHNDNLKSLSATKASKNVGDFLCGYIYLKSLDMDRKRSLF 189

Query: 486 VHVPDTN-VYSSEQTARGLQRIIELCIEQI 572
           VHVP  +  +SS +T+  L  I+E CI+Q+
Sbjct: 190 VHVPPVDRPFSSVKTSEILFSIVEQCIQQV 219


>AE014296-2486|AAN11795.1|  224|Drosophila melanogaster CG32147-PA
           protein.
          Length = 224

 Score =  114 bits (275), Expect = 9e-26
 Identities = 79/210 (37%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
 Frame = +3

Query: 3   VTGFGPFANHP-VNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPALWETHT 179
           V+GFGPF  H  VNASWEAVKLL +    +    +L    + V Y  VDE V  +W+   
Sbjct: 11  VSGFGPFLGHEAVNASWEAVKLLPEILTHDGIEYDLEKRLVSVEYGAVDEAVAEIWKRQ- 69

Query: 180 PKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANHVCTADG---AVRIHTKLNVE 350
           P L+IHVGVS +A  + +E  A+   ++R D  DK  AN  C       A  + T+L+V+
Sbjct: 70  PYLVIHVGVSGVAKCVYIEKLAYNHKFRRADNCDKKLANGTCELPNNGHANVLKTELDVD 129

Query: 351 RICKEFNDASPE-----------DSTRAVS----SKDAGRYLCEYIYYTSLSVDNSRTLF 485
           +I    N+   +           D+ +++S    SK+ G +LC YIY  SL +D  R+LF
Sbjct: 130 KIVAVVNENCADCVGPTQQPTHNDNLKSLSATKASKNVGDFLCGYIYLKSLDMDRKRSLF 189

Query: 486 VHVPDTN-VYSSEQTARGLQRIIELCIEQI 572
           VHVP  +  +SS +T+  L  I+E CI+Q+
Sbjct: 190 VHVPPVDRPFSSVKTSEILFSIVEQCIQQV 219


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,779,262
Number of Sequences: 53049
Number of extensions: 711011
Number of successful extensions: 1922
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1914
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)